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ASCL2 achaete-scute family bHLH transcription factor 2 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100455189, updated on 26-Mar-2024

Summary

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Gene symbol
ASCL2
Gene description
achaete-scute family bHLH transcription factor 2
Locus tag
CR201_G0045820
See related
Ensembl:ENSPPYG00000002926
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 9 NC_071994.2 (2263954..2266369, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 11 NC_071996.1 (2263942..2266357, complement)

Chromosome 9 - NC_071994.2Genomic Context describing neighboring genes Neighboring gene insulin Neighboring gene tyrosine hydroxylase Neighboring gene chromosome 9 C11orf21 homolog Neighboring gene tetraspanin 32

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in developmental process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
achaete-scute homolog 2
Names
achaete-scute complex homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071994.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    2263954..2266369 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002821378.4 → XP_002821424.1  achaete-scute homolog 2

    See identical proteins and their annotated locations for XP_002821424.1

    UniProtKB/TrEMBL
    A0A2J8S6K2, A0A663DIJ5, H2NCG5
    Related
    ENSPPYP00000003399.1
    Conserved Domains (1) summary
    cd19743
    Location:49 → 112
    bHLH_TS_ASCL2_Mash2; basic helix-loop-helix (bHLH) domain found in achaete-scute-like protein 2 (ASCL-2) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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