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LOC100453954 homeobox protein NANOG-like [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100453954, updated on 26-Mar-2024

Summary

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Gene symbol
LOC100453954
Gene description
homeobox protein NANOG-like
See related
Ensembl:ENSPPYG00000004233
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
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Genomic context

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Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 10 NC_071995.2 (8075611..8083339)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 12 NC_071997.1 (8076481..8083907)

Chromosome 10 - NC_071995.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 2, facilitated glucose transporter member 3 Neighboring gene myosin regulatory light polypeptide 9-like Neighboring gene NANOG neighbor homeobox-like Neighboring gene solute carrier family 2 member 3 Neighboring gene uncharacterized LOC134759485

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein NANOG-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071995.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    8075611..8083339
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009236146.4 → XP_009234421.3  homeobox protein NANOG-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases