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LOC100449428 protein CASC2 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100449428, updated on 6-Jun-2024

Summary

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Gene symbol
LOC100449428
Gene description
protein CASC2
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
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Genomic context

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See LOC100449428 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 8 NC_071993.2 (125085004..125247753)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 10 NC_071995.1 (121283639..121446509)

Chromosome 8 - NC_071993.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134762082 Neighboring gene uncharacterized LOC103891736 Neighboring gene RAB11 family interacting protein 2 Neighboring gene uncharacterized LOC129048365 Neighboring gene uncharacterized LOC129048128

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

General protein information

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Preferred Names
protein CASC2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071993.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    125085004..125247753
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063727781.1 → XP_063583851.1  protein CASC2

    UniProtKB/TrEMBL
    H2NBR4

RNA

  1. XR_010141629.1 RNA Sequence

  2. XR_008510660.2 RNA Sequence

  3. XR_008510657.2 RNA Sequence

  4. XR_010141630.1 RNA Sequence

  5. XR_008510659.2 RNA Sequence

  6. XR_008510656.2 RNA Sequence

  7. XR_008510658.2 RNA Sequence

  8. XR_008510653.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials