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rbx1 ring-box 1, E3 ubiquitin protein ligase [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100379935, updated on 18-Sep-2024

Summary

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Official Symbol
rbx1provided by Xenbase
Official Full Name
ring-box 1, E3 ubiquitin protein ligaseprovided by Xenbase
Primary source
Xenbase:XB-GENE-5779767
See related
Ensembl:ENSXETG00000035313
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (115967166..115972700, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (105965728..105971276, complement)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene X-prolyl aminopeptidase 3, mitochondrial Neighboring gene E1A binding protein p300 Neighboring gene L3MBTL2, polycomb repressive complex 1 subunit Neighboring gene uncharacterized LOC116410290

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of cullin-RING ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RBX1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    115967166..115972700 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002934726.5 → XP_002934772.2  E3 ubiquitin-protein ligase RBX1

    UniProtKB/TrEMBL
    A0A6I8S0I4, A0A6I8S8I3
    Related
    ENSXETP00000088979.1, ENSXETT00000089638.2
    Conserved Domains (1) summary
    cd16485
    Location:52 → 113
    mRING-H2-C3H2C2D_RBX1; modified RING finger, H2 subclass (C3H2C2D-type), found in RING-box protein 1 (RBX1) and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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