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LOC100374711 xanthine dehydrogenase/oxidase-like [ Saccoglossus kowalevskii ]

Gene ID: 100374711, updated on 19-Oct-2023

Summary

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Gene symbol
LOC100374711
Gene description
xanthine dehydrogenase/oxidase-like
See related
EnsemblRapid:LOC100374711
Gene type
protein coding
RefSeq status
MODEL
Organism
Saccoglossus kowalevskii
Lineage
Eukaryota; Metazoa; Hemichordata; Enteropneusta; Harrimaniidae; Saccoglossus
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Genomic context

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Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
101 current Skow_1.1 (GCF_000003605.2) Unplaced Scaffold NW_003107603.1 (12925..67713)

NW_003107603.1Genomic Context describing neighboring genes Neighboring gene NADP-dependent oxidoreductase domain-containing protein 1-like Neighboring gene dual specificity protein phosphatase 10-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003107603 unplaced scaffold reference Skow_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2 iron, 2 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xanthine dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xanthine dehydrogenase/oxidase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saccoglossus kowalevskii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Skow_1.1 Primary Assembly

Genomic

  1. NW_003107603.1 Reference Skow_1.1 Primary Assembly

    Range
    12925..67713
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006811886.1 → XP_006811949.1  xanthine dehydrogenase/oxidase-like

    Related
    XP_006811949.1, XM_006811886.1
    Conserved Domains (7) summary
    PLN02906
    Location:11 → 1306
    PLN02906; xanthine dehydrogenase
    cd00207
    Location:7 → 74
    fer2; 2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis ...
    pfam00941
    Location:224 → 402
    FAD_binding_5; FAD binding domain in molybdopterin dehydrogenase
    pfam01315
    Location:577 → 684
    Ald_Xan_dh_C; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
    pfam01799
    Location:75 → 146
    Fer2_2; [2Fe-2S] binding domain
    pfam02738
    Location:703 → 1228
    Ald_Xan_dh_C2; Molybdopterin-binding domain of aldehyde dehydrogenase
    pfam03450
    Location:410 → 514
    CO_deh_flav_C; CO dehydrogenase flavoprotein C-terminal domain
Nucleotide Protein
Heading Accession and Version

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