Lrtm1 leucine-rich repeats and transmembrane domains 1 [Rattus norvegicus (Norway rat)] - Gene

Summary

Symbol: Lrtm1provided by RGD
Full Name: leucine-rich repeats and transmembrane domains 1provided by RGD
Primary source: RGD:2321691
See related: AllianceGenome:RGD:2321691
Gene type: protein coding
RefSeq status: MODEL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Predicted to act upstream of or within positive regulation of synapse assembly. Predicted to be integral component of membrane. Orthologous to human LRTM1 (leucine rich repeats and transmembrane domains 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in Brain (RPKM 23.6), Lung (RPKM 8.1) and 8 other tissues See more
Orthologs: human mouse all
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Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	16	NC_086034.1 (4216947..4224447)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	16	NC_051351.1 (4210343..4217843)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	16	NC_005115.4 (4993728..5005110)

Chromosome 16 - NC_086034.1 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Submit: New GeneRIF Correction

Process	Evidence Code	Pubs
acts_upstream_of_or_within positive regulation of synapse assembly	ISO Inferred from Sequence Orthology more info

Preferred Names: leucine-rich repeat and transmembrane domain-containing protein 1; leucine-rich repeats and transmembrane domains 1

Names: leucine-rich repeat and transmembrane domain-containing protein 1-like; rCG42269-like

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The following sections contain reference sequences that belong to a specific genome build. Explain