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Rps20l4 ribosomal protein S20 like 4 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100359563, updated on 2-May-2024

Summary

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Official Symbol
Rps20l4provided by RGD
Official Full Name
ribosomal protein S20 like 4provided by RGD
Primary source
RGD:2323631
See related
Ensembl:ENSRNOG00000029843 AllianceGenome:RGD:2323631
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable RNA binding activity. Predicted to be involved in translation. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
8q31
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (95622091..95622496)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (86742044..86742448)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (93439613..93440039)

Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120094217 Neighboring gene inhibitor of Bruton tyrosine kinase Neighboring gene family with sequence similarity 162, member A, pseudogene 1 Neighboring gene uncharacterized LOC120094218 Neighboring gene quinolinate phosphoribosyltransferase, pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
small ribosomal subunit protein uS10-like
Names
40S ribosomal protein S20-like
ribosomal protein S20-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086026.1 Reference GRCr8

    Range
    95622091..95622496
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039082548.2 → XP_038938476.1  small ribosomal subunit protein uS10-like

    UniProtKB/TrEMBL
    A0A0H2UHG7, D3ZZK1
    Related
    ENSRNOP00000051318.2
    Conserved Domains (1) summary
    cl00314
    Location:16 → 116
    Ribosomal_S10; Ribosomal protein S10p/S20e
Nucleotide Protein Strain
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