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LOC100350286 anaphase-promoting complex subunit 5 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100350286, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100350286
Gene description
anaphase-promoting complex subunit 5
See related
Ensembl:ENSOCUG00000002722
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
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Genomic context

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Location:
chromosome: 21
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 21 NC_067394.1 (6737569..6783276)

Chromosome 21 - NC_067394.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase RNF34 Neighboring gene uncharacterized LOC127484749 Neighboring gene U1 spliceosomal RNA Neighboring gene calcium/calmodulin-dependent protein kinase kinase 2 Neighboring gene P2X purinoceptor 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067394.1 Chromosome 21 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anaphase-promoting complex-dependent catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of mitotic metaphase/anaphase transition IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K11-linked ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of anaphase-promoting complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anaphase-promoting complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067394.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    6737569..6783276
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008272198.3 → XP_008270420.1  anaphase-promoting complex subunit 5 isoform X3

    Conserved Domains (4) summary
    sd00016
    Location:248 → 282
    Apc5; TPR repeat [structural motif]
    sd00006
    Location:467 → 495
    TPR; TPR repeat [structural motif]
    pfam12862
    Location:254 → 354
    ANAPC5; Anaphase-promoting complex subunit 5
    cd16270
    Location:32 → 165
    Apc5_N; N-terminal domain of the anaphase-promoting complex subunit Apc5 (or Anapc5)

  2. XM_002719739.4 → XP_002719785.1  anaphase-promoting complex subunit 5 isoform X1

    UniProtKB/TrEMBL
    G1SI60
    Related
    ENSOCUP00000002358.4
    Conserved Domains (4) summary
    sd00016
    Location:248 → 282
    Apc5; TPR repeat [structural motif]
    sd00006
    Location:467 → 495
    TPR; TPR repeat [structural motif]
    pfam12862
    Location:254 → 354
    ANAPC5; Anaphase-promoting complex subunit 5
    cd16270
    Location:32 → 165
    Apc5_N; N-terminal domain of the anaphase-promoting complex subunit Apc5 (or Anapc5)

  3. XM_002719740.4 → XP_002719786.2  anaphase-promoting complex subunit 5 isoform X2

    UniProtKB/TrEMBL
    G1SI60
    Conserved Domains (4) summary
    sd00016
    Location:248 → 282
    Apc5; TPR repeat [structural motif]
    sd00006
    Location:454 → 482
    TPR; TPR repeat [structural motif]
    pfam12862
    Location:254 → 354
    ANAPC5; Anaphase-promoting complex subunit 5
    cd16270
    Location:32 → 165
    Apc5_N; N-terminal domain of the anaphase-promoting complex subunit Apc5 (or Anapc5)
Nucleotide Protein
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