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t2r21 bitter taste receptor 21 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100335072, updated on 17-Aug-2024

Summary

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Official Symbol
t2r21provided by Xenbase
Official Full Name
bitter taste receptor 21provided by Xenbase
Primary source
Xenbase:XB-GENE-29099547
See related
Ensembl:ENSXETG00000044338
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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Location:
chromosome: 9
Exon count:
1
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (12094935..12095819, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (6503355..6504239, complement)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene bitter taste receptor 49 Neighboring gene bitter taste receptor 48 Neighboring gene taste receptor type 2 member 40 Neighboring gene bitter taste receptor 20

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proceedings of the SMBE Tri-National Young Investigators' Workshop 2005. Lineage-specific expansions and contractions of the bitter taste receptor gene repertoire in vertebrates. Go Y, et al. Mol Biol Evol, 2006 May. PMID 16484289

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
  
enables bitter taste receptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within sensory perception of taste IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
bitter taste receptor 21

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001172009.1 → NP_001165480.1  bitter taste receptor 21

    See identical proteins and their annotated locations for NP_001165480.1

    Status: PROVISIONAL

    Source sequence(s)
    AB249789
    UniProtKB/TrEMBL
    A0A803JNH2, F6SJ03, Q2AB62
    Related
    ENSXETP00000109489.1, ENSXETT00000118374.1
    Conserved Domains (1) summary
    pfam05296
    Location:1 → 282
    TAS2R; Taste receptor protein (TAS2R)

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    12094935..12095819 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials