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FRG2C FSHD region gene 2 family member C [ Homo sapiens (human) ]

Gene ID: 100288801, updated on 23-Nov-2021

Summary

Official Symbol
FRG2Cprovided by HGNC
Official Full Name
FSHD region gene 2 family member Cprovided by HGNC
Primary source
HGNC:HGNC:33626
See related
Ensembl:ENSG00000172969
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See FRG2C in Genome Data Viewer
Location:
3p12.3
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 3 NC_000003.12 (75646761..75667217)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (75713479..75716368)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ribosomal protein L23a pseudogene 49 Neighboring gene clustered mitochondria homolog pseudogene 10 Neighboring gene microRNA 1324 Neighboring gene angiogenic factor with G-patch and FHA domains 1 pseudogene 3 Neighboring gene retinoic acid receptor responder 2 pseudogene 1 Neighboring gene double homeobox 4 like 26 (pseudogene) Neighboring gene long intergenic non-protein coding RNA 960

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General protein information

Preferred Names
protein FRG2-like-2
Names
FSHD region gene 2 family, member C-like
FSHD region gene 2 protein family member C
HSA3-FRG2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001124759.5NP_001118231.1  protein FRG2-like-2

    See identical proteins and their annotated locations for NP_001118231.1

    Status: VALIDATED

    Source sequence(s)
    AC108724
    Consensus CDS
    CCDS43108.1
    UniProtKB/Swiss-Prot
    A6NGY1
    Related
    ENSP00000312299.3, ENST00000308062.8
    Conserved Domains (1) summary
    pfam15315
    Location:62242
    FRG2; Facioscapulohumeral muscular dystrophy candidate 2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p13 Primary Assembly

    Range
    75646761..75667217
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011533254.3XP_011531556.1  protein FRG2-like-2 isoform X1

    See identical proteins and their annotated locations for XP_011531556.1

    UniProtKB/Swiss-Prot
    A6NGY1
    Conserved Domains (1) summary
    pfam15315
    Location:62242
    FRG2; Facioscapulohumeral muscular dystrophy candidate 2
  2. XM_011533256.3XP_011531558.1  protein FRG2-like-2 isoform X2

    UniProtKB/TrEMBL
    C9JUX3
    Related
    ENSP00000419432.1, ENST00000464571.1
    Conserved Domains (1) summary
    pfam15315
    Location:61241
    FRG2; Facioscapulohumeral muscular dystrophy candidate 2
  3. XM_017005489.2XP_016860978.1  protein FRG2-like-2 isoform X3

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