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upb1 ureidopropionase, beta [ Salmo salar (Atlantic salmon) ]

Gene ID: 100286709, updated on 8-Mar-2024

Summary

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Gene symbol
upb1
Gene description
ureidopropionase, beta
See related
Ensembl:ENSSSAG00000076908
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Also known as
bup1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: ssa20
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa20 NC_059461.1 (19786110..19797187, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa20 NC_027319.1 (18701189..18722636, complement)

Chromosome ssa20 - NC_059461.1Genomic Context describing neighboring genes Neighboring gene purinergic receptor P2X, ligand-gated ion channel, 7 Neighboring gene purinergic receptor P2X, ligand-gated ion channel, 4b Neighboring gene protein GUCD1-like Neighboring gene uncharacterized protein C22orf15 Neighboring gene adenosine A2a receptor a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome. Leong JS, et al. BMC Genomics, 2010 Apr 30. PMID 20433749, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-ureidopropionase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in beta-alanine biosynthetic process via 3-ureidopropionate IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-ureidopropionase
Names
beta-ureidopropionase 1
NP_001140121.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001146649.2 → NP_001140121.1  beta-ureidopropionase

    See identical proteins and their annotated locations for NP_001140121.1

    Status: PROVISIONAL

    Source sequence(s)
    BT056453
    UniProtKB/TrEMBL
    B9ELC8
    Related
    ENSSSAP00000162256.1, ENSSSAT00000220175.1
    Conserved Domains (2) summary
    cd07587
    Location:9 → 369
    ML_beta-AS; mammalian-like beta-alanine synthase (beta-AS) and similar proteins (class 5 nitrilases)
    PLN00202
    Location:6 → 383
    PLN00202; beta-ureidopropionase

RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059461.1 Reference Ssal_v3.1

    Range
    19786110..19797187 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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