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LOC100279930 uncharacterized LOC100279930 [ Zea mays ]

Gene ID: 100279930, updated on 26-Jun-2024

Summary

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Gene symbol
LOC100279930
Gene description
uncharacterized LOC100279930
Locus tag
ZEAMMB73_Zm00001d018758
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
TIDP3457; GRMZM2G064799
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Genomic context

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Location:
chromosome: 7
Exon count:
16
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 7 NC_050102.1 (4339271..4343974)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 7 NC_024465.2 (4402560..4407263)

Chromosome 7 - NC_050102.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L5, mitochondrial-like Neighboring gene uncharacterized LOC100285805 Neighboring gene uncharacterized LOC118472898 Neighboring gene uncharacterized LOC109941237

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization. Gardiner J, et al. Plant Physiol, 2004 Apr. PMID 15020742, Free PMC Article
  2. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430
  3. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
  4. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

  • PZA02983_Zea_mays_ssp._parviglumis_CIMMYT_8783 (e-PCR)

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate dehydrogenase (quinone) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial electron transport, succinate to ubiquinone IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
Names
succinate dehydrogenase flavoprotein subunit
succinate dehydrogenase1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001152880.1 → NP_001146352.1  Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial

    See identical proteins and their annotated locations for NP_001146352.1

    Status: PROVISIONAL

    Source sequence(s)
    BT055148
    UniProtKB/TrEMBL
    B6U124, B8A0Q6
    Conserved Domains (1) summary
    PLN00128
    Location:1 → 619
    PLN00128; Succinate dehydrogenase [ubiquinone] flavoprotein subunit

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050102.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    4339271..4343974
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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