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EOLA2-DT EOLA2 divergent transcript [ Homo sapiens (human) ]

Gene ID: 100272228, updated on 4-Mar-2025
Official Symbol
EOLA2-DTprovided by HGNC
Official Full Name
EOLA2 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:48579
See related
Ensembl:ENSG00000235703 AllianceGenome:HGNC:48579
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LINC00894
Expression
Ubiquitous expression in prostate (RPKM 4.2), thyroid (RPKM 3.9) and 25 other tissues See more
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See EOLA2-DT in Genome Data Viewer
Location:
Xq28
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (149938548..150016787)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (148206174..148284407)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (149106766..149185018)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene MAGEA8 antisense RNA 1 Neighboring gene MAGE family member A8 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21047 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21046 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21049 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21048 Neighboring gene heat shock transcription factor family, X-linked member 4 Neighboring gene endothelium and lymphocyte associated ASCH domain 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:149289377-149289876 Neighboring gene nucleolar protein 11 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:149385283-149385784 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:149385785-149386284 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chrX:149387913-149388449 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chrX:149393501-149394088 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chrX:149394089-149394674 Neighboring gene microRNA 2114

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Related articles in PubMed

  1. Downregulation of LINC00894-002 Contributes to Tamoxifen Resistance by Enhancing the TGF-β Signaling Pathway. Zhang X, et al. Biochemistry (Mosc), 2018 May. PMID 29738694
  2. LINC00894 inhibited neuron cellular apoptosis and regulated activating transcription factor 3 expression. Hu H, et al. Gene, 2024 Nov 15. PMID 38857714
  3. Molecular and phenotypic variation in patients with severe Hunter syndrome. Timms KM, et al. Hum Mol Genet, 1997 Mar. PMID 9147653
  4. High-throughput analyses of hnRNP H1 dissects its multi-functional aspect. Uren PJ, et al. RNA Biol, 2016. PMID 26760575, Free PMC Article
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al. Genome Res, 2006 Jan. PMID 16344560, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. LINC00894 inhibited neuron cellular apoptosis and regulated activating transcription factor 3 expression.
    Title: LINC00894 inhibited neuron cellular apoptosis and regulated activating transcription factor 3 expression.
Submit: New GeneRIF Correction

Review eQTL and phenotype association data in this region using PheGenI

See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Products Interactant Other Gene Complex Source Pubs Description

Markers

Other Names

  • long intergenic non-protein coding RNA 894

Clone Names

  • FLJ30251, FLJ44451

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027456.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC244099, BC032484, DA306809
    Related
    ENST00000444489.5

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    149938548..150016787
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    148206174..148284407
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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