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LOC100249424 uncharacterized LOC100249424 [ Vitis vinifera (wine grape) ]

Gene ID: 100249424, updated on 6-Jun-2024

Summary

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Gene symbol
LOC100249424
Gene description
uncharacterized LOC100249424
Locus tag
VIT_00007149001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 2 NC_081806.1 (5926728..5937177, complement)
102 previous assembly 12X (GCF_000003745.3) 2 NC_012008.3 (5399192..5409387)

Chromosome 2 - NC_081806.1Genomic Context describing neighboring genes Neighboring gene phosphatidylglycerophosphate phosphatase PTPMT2 Neighboring gene pentatricopeptide repeat-containing protein At5g47360 Neighboring gene ATPase 11, plasma membrane-type Neighboring gene RING-H2 finger protein ATL22-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiolester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC100249424
Names
palmitoyl-protein thioesterase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081806.1 Reference ASM3070453v1 Primary Assembly

    Range
    5926728..5937177 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002269749.4 → XP_002269785.4  uncharacterized protein LOC100249424

    UniProtKB/TrEMBL
    F6HD59
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials