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WIPI1 WD repeat domain, phosphoinositide interacting 1 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100230726, updated on 8-Mar-2024

Summary

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Gene symbol
WIPI1
Gene description
WD repeat domain, phosphoinositide interacting 1
See related
Ensembl:ENSTGUG00000004110
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 18 NC_044230.2 (2648099..2668014)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 18 NC_045016.1 (2790214..2809555)

Chromosome 18 - NC_044230.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115497667 Neighboring gene uncharacterized LOC121470877 Neighboring gene arylsulfatase G Neighboring gene solute carrier family 16 member 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein lipidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extrinsic component of membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat domain phosphoinositide-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044230.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    2648099..2668014
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012578483.4 → XP_012433937.2  WD repeat domain phosphoinositide-interacting protein 1

    UniProtKB/TrEMBL
    H0Z102
    Related
    ENSTGUP00000004240.2
    Conserved Domains (2) summary
    sd00039
    Location:136 → 178
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:82 → 256
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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