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LOC100220428 sestrin-3 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100220428, updated on 11-Apr-2024

Summary

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Gene symbol
LOC100220428
Gene description
sestrin-3
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
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Genomic context

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See LOC100220428 in Genome Data Viewer
Location:
chromosome: 4A
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 4A NC_044216.2 (18801014..18808394)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 4A NC_045003.1 (18737211..18744573)

Chromosome 4A - NC_044216.2Genomic Context describing neighboring genes Neighboring gene mediator complex subunit 12 Neighboring gene interleukin 2 receptor subunit gamma Neighboring gene forkhead box O4 Neighboring gene sorting nexin 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-leucine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on peroxide as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to L-leucine IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to leucine starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of macroautophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of response to reactive oxygen species IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sestrin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044216.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    18801014..18808394
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032748450.2 → XP_032604341.1  sestrin-3 isoform X1

    Conserved Domains (1) summary
    pfam04636
    Location:21 → 452
    PA26; PA26 p53-induced protein (sestrin)

  2. XM_032748451.2 → XP_032604342.1  sestrin-3 isoform X2

    Conserved Domains (1) summary
    pfam04636
    Location:21 → 446
    PA26; PA26 p53-induced protein (sestrin)
Nucleotide Protein
Heading Accession and Version

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