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GRHL1 grainyhead like transcription factor 1 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100220176, updated on 8-Mar-2024

Summary

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Gene symbol
GRHL1
Gene description
grainyhead like transcription factor 1
See related
Ensembl:ENSTGUG00000013038
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See GRHL1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
16
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 3 NC_044214.2 (15068355..15108421, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 3 NC_045001.1 (14137780..14177846, complement)

Chromosome 3 - NC_044214.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115494731 Neighboring gene KLF transcription factor 11 Neighboring gene TATA-box binding protein associated factor, RNA polymerase I subunit B Neighboring gene uncharacterized LOC121469665

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
grainyhead-like protein 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044214.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    15068355..15108421 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030270060.3 → XP_030125920.1  grainyhead-like protein 1 homolog

    UniProtKB/TrEMBL
    H0ZS33
    Related
    ENSTGUP00000013427.2
    Conserved Domains (1) summary
    pfam04516
    Location:237 → 442
    CP2; CP2 transcription factor
Nucleotide Protein
Heading Accession and Version

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