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LOC100215492 nuclear pore complex protein Nup205 [ Hydra vulgaris (swiftwater hydra) ]

Gene ID: 100215492, updated on 1-Aug-2024

Summary

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Gene symbol
LOC100215492
Gene description
nuclear pore complex protein Nup205
See related
EnsemblRapid:LOC100215492
Gene type
protein coding
RefSeq status
MODEL
Organism
Hydra vulgaris
Lineage
Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra
Also known as
nup205
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Genomic context

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Location:
chromosome: 12
Exon count:
34
Annotation release Status Assembly Chr Location
RS_2024_06 current HydraT2T_105 (GCF_037890685.1) 12 NC_088975.1 (51809555..51876276, complement)
RS_2024_06 current HydraT2T_AEP (GCF_038396675.1) 12 NC_088931.1 (56600091..56674283, complement)
103 previous assembly Hydra_105_v3 (GCF_022113875.1) 2 NC_061157.1 (26191639..26257954)

Chromosome 12 - NC_088975.1Genomic Context describing neighboring genes Neighboring gene UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 Neighboring gene uncharacterized LOC136097086 Neighboring gene uncharacterized LOC105846245 Neighboring gene uncharacterized LOC124807598 Neighboring gene zinc finger SWIM domain-containing protein 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear pore organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore inner ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear pore complex protein Nup205
Names
nucleoporin 205kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037890685.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HydraT2T_105 Primary Assembly

Genomic

  1. NC_088975.1 Reference HydraT2T_105 Primary Assembly

    Range
    51809555..51876276 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065829061.1 → XP_065685133.1  nuclear pore complex protein Nup205 isoform X1

    UniProtKB/TrEMBL
    T2M8P4

  2. XM_047269620.2 → XP_047125576.1  nuclear pore complex protein Nup205 isoform X1

    UniProtKB/TrEMBL
    T2M8P4
    Related
    XP_047125576.1

Alternate HydraT2T_AEP

Genomic

  1. NC_088931.1 Alternate HydraT2T_AEP

    Range
    56600091..56674283 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065813803.1 → XP_065669875.1  nuclear pore complex protein Nup205 isoform X2

    UniProtKB/TrEMBL
    T2M8P4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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