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LOC100202956 transmembrane protein 135 [ Hydra vulgaris (swiftwater hydra) ]

Gene ID: 100202956, updated on 7-Sep-2022

Summary

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Gene symbol
LOC100202956
Gene description
transmembrane protein 135
See related
EnsemblRapid:LOC100202956
Gene type
protein coding
RefSeq status
MODEL
Organism
Hydra vulgaris
Lineage
Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra
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Genomic context

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Location:
chromosome: 3
Exon count:
16
Annotation release Status Assembly Chr Location
103 current Hydra_105_v3 (GCF_022113875.1) 3 NC_061158.1 (2210857..2256209)
102 previous assembly Hydra_RP_1.0 (GCF_000004095.1) Unplaced Scaffold NW_004167138.1 (121889..170256)

Chromosome 3 - NC_061158.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105848812 Neighboring gene nuclear transcription factor Y subunit gamma Neighboring gene uncharacterized LOC124808880 Neighboring gene uncharacterized LOC124808686 Neighboring gene serine/threonine-protein kinase 40

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RNAseq versus genome-predicted transcriptomes: a large population of novel transcripts identified in an Illumina-454 Hydra transcriptome. Wenger Y, et al. BMC Genomics, 2013 Mar 25. PMID 23530871, Free PMC Article
  2. Punctuated emergences of genetic and phenotypic innovations in eumetazoan, bilaterian, euteleostome, and hominidae ancestors. Wenger Y, et al. Genome Biol Evol, 2013. PMID 24065732, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
transmembrane protein 135

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hydra vulgaris Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Hydra_105_v3 Primary Assembly

Genomic

  1. NC_061158.1 Reference Hydra_105_v3 Primary Assembly

    Range
    2210857..2256209
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002166264.4 → XP_002166300.2  transmembrane protein 135 isoform X1

    UniProtKB/TrEMBL
    T2MAM1
    Related
    XP_002166300.2, XM_002166264.4
    Conserved Domains (1) summary
    pfam15982
    Location:13 → 141
    TMEM135_C_rich; N-terminal cysteine-rich region of Transmembrane protein 135

  2. XM_047272006.1 → XP_047127962.1  transmembrane protein 135 isoform X2

    Related
    XP_047127962.1, XM_047272006.1
Nucleotide Protein
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