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TRM-CAT3-2 tRNA-Met (anticodon CAT) 3-2 [ Homo sapiens (human) ]

Gene ID: 100189111, updated on 17-Sep-2024

Summary

Official Symbol
TRM-CAT3-2provided by HGNC
Official Full Name
tRNA-Met (anticodon CAT) 3-2provided by HGNC
Primary source
HGNC:HGNC:34673
See related
AllianceGenome:HGNC:34673
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAM8
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Genomic context

See TRM-CAT3-2 in Genome Data Viewer
Location:
6p22.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (28953265..28953337, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (28828036..28828108, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (28921042..28921114, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene tRNA-Met (anticodon CAT) 3-1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:28917695-28918254 Neighboring gene Sharpr-MPRA regulatory region 4538 Neighboring gene tRNA-Lys (anticodon TTT) 3-3 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:28928607-28929806 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:28936514-28936698 Neighboring gene keratin 18 pseudogene 1 Neighboring gene RNA, 7SL, cytoplasmic 471, pseudogene

Genomic regions, transcripts, and products

General gene information

Other Names

  • tRNA-Met (CAT) 3-2
  • transfer RNA methionine 8 (anticodon CAU)
  • transfer RNA-Met (CAT) 3-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    28953265..28953337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_2

Genomic

  1. NT_113891.3 Reference GRCh38.p14 ALT_REF_LOCI_2

    Range
    439672..439744 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_4

Genomic

  1. NT_167246.2 Reference GRCh38.p14 ALT_REF_LOCI_4

    Range
    218827..218899 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_5

Genomic

  1. NT_167247.2 Reference GRCh38.p14 ALT_REF_LOCI_5

    Range
    219010..219082 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_6

Genomic

  1. NT_167248.2 Reference GRCh38.p14 ALT_REF_LOCI_6

    Range
    218846..218918 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_7

Genomic

  1. NT_167249.2 Reference GRCh38.p14 ALT_REF_LOCI_7

    Range
    262651..262723 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    28828036..28828108 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)