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LOC100186187 ubiquitin carboxyl-terminal hydrolase 37 [ Ciona intestinalis (vase tunicate) ]

Gene ID: 100186187, updated on 21-Dec-2023

Summary

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Gene symbol
LOC100186187
Gene description
ubiquitin carboxyl-terminal hydrolase 37
See related
Ensembl:ENSCING00000010888
Gene type
protein coding
RefSeq status
MODEL
Organism
Ciona intestinalis
Lineage
Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
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Genomic context

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Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
104 current KH (GCF_000224145.3) Unplaced Scaffold NW_004190413.2 (68420..81393, complement)

NW_004190413.2Genomic Context describing neighboring genes Neighboring gene diacylglycerol kinase beta Neighboring gene early endosome antigen 1-like Neighboring gene uncharacterized LOC108950273

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004190413 Unplaced Scaffold Reference KH Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A cDNA resource from the basal chordate Ciona intestinalis. Satou Y, et al. Genesis, 2002 Aug. PMID 12203911

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G1/S transition of mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase 37

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KH Primary Assembly

Genomic

  1. NW_004190413.2 Reference KH Primary Assembly

    Range
    68420..81393 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002127652.5 → XP_002127688.1  ubiquitin carboxyl-terminal hydrolase 37

    UniProtKB/TrEMBL
    A0A1W2WEF4, F7AGZ7
    Related
    ENSCINP00000029609
    Conserved Domains (2) summary
    cd02257
    Location:167 → 620
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam00443
    Location:167 → 619
    UCH; Ubiquitin carboxyl-terminal hydrolase
Nucleotide Protein
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