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LOC100176817 homocysteine S-methyltransferase 1-like [ Ciona intestinalis (vase tunicate) ]

Gene ID: 100176817, updated on 21-Dec-2023

Summary

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Gene symbol
LOC100176817
Gene description
homocysteine S-methyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ciona intestinalis
Lineage
Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
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Genomic context

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See LOC100176817 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
104 current KH (GCF_000224145.3) 1 NC_020166.2 (5544700..5547409)

Chromosome 1 - NC_020166.2Genomic Context describing neighboring genes Neighboring gene sorting nexin-33-like Neighboring gene mediator of RNA polymerase II transcription subunit 4-like Neighboring gene nucleoporin NUP152-like Neighboring gene cannabinoid receptor Neighboring gene uncharacterized LOC100181472 Neighboring gene stabilizer of axonemal microtubules 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_020166.2 Chromosome 1 Reference KH Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S-adenosylmethionine-homocysteine S-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in S-methylmethionine cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in methionine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homocysteine S-methyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KH Primary Assembly

Genomic

  1. NC_020166.2 Reference KH Primary Assembly

    Range
    5544700..5547409
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026835221.1 → XP_026691022.1  homocysteine S-methyltransferase 1-like

    UniProtKB/TrEMBL
    F6XC87
    Conserved Domains (1) summary
    cl22882
    Location:6 → 297
    S-methyl_trans; Homocysteine S-methyltransferase
Nucleotide Protein
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Molecular Biology Databases
Research Materials