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LOC100175858 succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like [ Ciona intestinalis (vase tunicate) ]

Gene ID: 100175858, updated on 21-Dec-2023

Summary

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Gene symbol
LOC100175858
Gene description
succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ciona intestinalis
Lineage
Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
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Genomic context

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See LOC100175858 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
104 current KH (GCF_000224145.3) 1 NC_020166.2 (7920664..7927795, complement)

Chromosome 1 - NC_020166.2Genomic Context describing neighboring genes Neighboring gene baculoviral IAP repeat-containing protein 3 Neighboring gene uncharacterized LOC100186046 Neighboring gene twinfilin-2-like Neighboring gene alpha-L-fucosidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_020166.2 Chromosome 1 Reference KH Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate-CoA ligase (ADP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in succinyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of succinate-CoA ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KH Primary Assembly

Genomic

  1. NC_020166.2 Reference KH Primary Assembly

    Range
    7920664..7927795 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002131540.4 → XP_002131576.1  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like

    UniProtKB/TrEMBL
    F7A4H8
    Conserved Domains (3) summary
    PRK00696
    Location:37 → 427
    sucC; succinyl-CoA synthetase subunit beta; Provisional
    pfam00549
    Location:305 → 425
    Ligase_CoA; CoA-ligase
    pfam08442
    Location:37 → 246
    ATP-grasp_2; ATP-grasp domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials