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CBR1-AS1 CBR1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100133286, updated on 23-Nov-2021

Summary

Official Symbol
CBR1-AS1provided by HGNC
Official Full Name
CBR1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:55777
See related
Ensembl:ENSG00000230212
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in duodenum (RPKM 51.4), small intestine (RPKM 31.1) and 16 other tissues See more
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Genomic context

See CBR1-AS1 in Genome Data Viewer
Location:
21q22.12
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 21 NC_000021.9 (36069642..36126640, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (37441940..37498938, complement)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene SET domain containing 4 Neighboring gene ribosomal modification protein rimK like family member B pseudogene 1 Neighboring gene SETD4 antisense RNA 1 Neighboring gene RNA, U6 small nuclear 992, pseudogene Neighboring gene carbonyl reductase 1 Neighboring gene uncharacterized LOC105369306 Neighboring gene CBR3 antisense RNA 1 Neighboring gene mediator of cell motility 1 pseudogene 1 Neighboring gene ribosomal protein S9 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Genome-wide meta-analysis identifies 56 bone mineral density loci and reveals 14 loci associated with risk of fracture.
EBI GWAS Catalog

General gene information

Markers

Clone Names

  • AP000688.14

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040084.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK303953
    Related
    ENST00000535199.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p13 Primary Assembly

    Range
    36069642..36126640 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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