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KDM4A-AS1 KDM4A antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100132774, updated on 29-Mar-2018

Summary

Official Symbol
KDM4A-AS1provided by HGNC
Official Full Name
KDM4A antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:40528
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in skin (RPKM 2.5), prostate (RPKM 2.2) and 25 other tissues See more

Genomic context

See KDM4A-AS1 in Genome Data Viewer
Location:
1p34.2-p34.1
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 1 NC_000001.11 (43699724..43707341, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (44165395..44173032, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene SZT2, KICSTOR complex subunit Neighboring gene hydroxypyruvate isomerase (putative) Neighboring gene protein tyrosine phosphatase, receptor type F Neighboring gene lysine demethylase 4A Neighboring gene uncharacterized LOC101929592 Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 3 Neighboring gene microRNA 6079

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Markers

Other Names

  • KDM4A antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033827.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC073819, BC094867

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p12 Primary Assembly

    Range
    43699724..43707341 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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