U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

EHBP1-AS1 EHBP1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100132215, updated on 10-Oct-2023

Summary

Official Symbol
EHBP1-AS1provided by HGNC
Official Full Name
EHBP1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:55766
See related
Ensembl:ENSG00000231609
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in ovary (RPKM 9.8), liver (RPKM 6.3) and 25 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See EHBP1-AS1 in Genome Data Viewer
Location:
2p15
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (63043922..63048521, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (63050999..63055598, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (63271057..63275656, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr2:62804913-62806112 Neighboring gene ribosomal L24 domain containing 1 pseudogene 2 Neighboring gene NANOG hESC enhancer GRCh37_chr2:62874108-62874609 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15867 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15868 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15869 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:62898481-62898982 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15870 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11540 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11541 Neighboring gene EH domain binding protein 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15871 Neighboring gene Sharpr-MPRA regulatory region 1961 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15872 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:63062886-63063515 Neighboring gene VISTA enhancer hs690 Neighboring gene ribosomal protein S20 pseudogene 9 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15873 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:63270899-63271878 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:63271879-63272858 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:63274968-63275716 Neighboring gene VISTA enhancer hs1066 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11542 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:63280773-63281719 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:63283391-63283950 Neighboring gene Sharpr-MPRA regulatory region 3143 Neighboring gene BAR/IMD domain containing adaptor protein 2 like 1 pseudogene Neighboring gene orthodenticle homeobox 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027069.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) is the longer transcript.
    Source sequence(s)
    BC047612
    Related
    ENST00000429952.5
  2. NR_033389.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) has an alternate 5' exon and is shorter, as compared to variant 1.
    Source sequence(s)
    AK295275, BC047612

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    63043922..63048521 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    63050999..63055598 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)