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LINC01405 long intergenic non-protein coding RNA 1405 [ Homo sapiens (human) ]

Gene ID: 100131138, updated on 21-Dec-2019

Summary

Official Symbol
LINC01405provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1405provided by HGNC
Primary source
HGNC:HGNC:50688
See related
Ensembl:ENSG00000185847
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in prostate (RPKM 4.3), heart (RPKM 2.3) and 1 other tissue See more

Genomic context

See LINC01405 in Genome Data Viewer
Location:
12q24.11
Exon count:
2
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (110936602..110937448)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (111374406..111375252)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene VISTA enhancer hs2149 Neighboring gene myosin light chain 2 Neighboring gene VISTA enhancer hs2493 Neighboring gene uncharacterized LOC105369980 Neighboring gene uncharacterized LOC105369981

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Pathways from PubChem

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_036513.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AJ276555, AW015651
    Related
    ENST00000331096.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    110936602..110937448
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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