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C9orf92 chromosome 9 open reading frame 92 [ Homo sapiens (human) ]

Gene ID: 100129385, updated on 23-Nov-2021

Summary

Official Symbol
C9orf92provided by HGNC
Official Full Name
chromosome 9 open reading frame 92provided by HGNC
Primary source
HGNC:HGNC:19054
See related
Ensembl:ENSG00000205549
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Em:AL513424.1
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See C9orf92 in Genome Data Viewer
Location:
9p22.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (16203935..16276313, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (16203933..16276311, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 171 Neighboring gene uncharacterized LOC107987049 Neighboring gene RNA, U6 small nuclear 14, pseudogene Neighboring gene basonuclin 2 Neighboring gene VISTA enhancer hs307 Neighboring gene BNC2 antisense RNA 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_171034.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL513424
    Related
    ENST00000380685.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    16203935..16276313 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001271829.1: Suppressed sequence

    Description
    NM_001271829.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.
  2. NM_001364979.1: Suppressed sequence

    Description
    NM_001364979.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.
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