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WRKY14 WRKY transcription factor 14 [ Glycine max (soybean) ]

Gene ID: 100127371, updated on 7-Dec-2023

Summary

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Gene symbol
WRKY14
Gene description
WRKY transcription factor 14
Locus tag
GLYMA_11G053100v4
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
Also known as
WRKY; SoyWRKY15d
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Genomic context

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Location:
chromosome: 11
Exon count:
3
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 11 NC_038247.2 (3989241..3990902)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 11 NC_038247.1 (3994660..3996321)

Chromosome 11 - NC_038247.2Genomic Context describing neighboring genes Neighboring gene UPF0481 protein At3g47200-like Neighboring gene glycosyltransferase Neighboring gene xylan biosynthesis protein IRX15-like protein Neighboring gene uncharacterized LOC100305922

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential expression of a WRKY gene between wild and cultivated soybeans correlates to seed size. Gu Y, et al. J Exp Bot, 2017 May 17. PMID 28472462, Free PMC Article
  2. Soybean WRKY-type transcription factor genes, GmWRKY13, GmWRKY21, and GmWRKY54, confer differential tolerance to abiotic stresses in transgenic Arabidopsis plants. Zhou QY, et al. Plant Biotechnol J, 2008 Jun. PMID 18384508

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WRKY transcription factor 14

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001317569.2 → NP_001304498.2  WRKY transcription factor 14 isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1.
    Source sequence(s)
    ACUP04003797, KM587699
    UniProtKB/TrEMBL
    A0A0B4SXC9
    Conserved Domains (2) summary
    smart00774
    Location:248 → 305
    WRKY; DNA binding domain
    pfam10533
    Location:210 → 245
    Plant_zn_clust; Plant zinc cluster domain

  2. NM_001361262.1 → NP_001348191.1  WRKY transcription factor 14 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
    Source sequence(s)
    ACUP04003797
    UniProtKB/TrEMBL
    A0A0B4SXC9, I1LHB2
    Conserved Domains (2) summary
    smart00774
    Location:249 → 306
    WRKY; DNA binding domain
    pfam10533
    Location:204 → 246
    Plant_zn_clust; Plant zinc cluster domain

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038247.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    3989241..3990902
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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