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tst thiosulfate sulfurtransferase [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100125137, updated on 17-Aug-2024

Summary

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Official Symbol
tstprovided by Xenbase
Official Full Name
thiosulfate sulfurtransferaseprovided by Xenbase
Primary source
Xenbase:XB-GENE-951808
See related
Ensembl:ENSXETG00000016057
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
rds
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (123285591..123294068)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (112852669..112859856)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene transmembrane serine protease 6 Neighboring gene potassium channel tetramerization domain containing 17 Neighboring gene mercaptopyruvate sulfurtransferase Neighboring gene ciliary microtubule inner protein 4 Neighboring gene colony stimulating factor 2 receptor beta common subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables thiosulfate sulfurtransferase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
thiosulfate sulfurtransferase
Names
thiosulfate sulfurtransferase (rhodanese)
NP_001096508.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001103038.1 → NP_001096508.1  thiosulfate sulfurtransferase

    See identical proteins and their annotated locations for NP_001096508.1

    Status: PROVISIONAL

    Source sequence(s)
    BC135409
    UniProtKB/TrEMBL
    A4QNC5, F6X0C4
    Related
    ENSXETP00000035013.5, ENSXETT00000035013.5
    Conserved Domains (1) summary
    COG2897
    Location:7 → 278
    SseA; 3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains [Inorganic ion transport and metabolism]

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    123285591..123294068
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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