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CCHCR1 coiled-coil alpha-helical rod protein 1 [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100091443, updated on 30-Apr-2024

Summary

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Gene symbol
CCHCR1
Gene description
coiled-coil alpha-helical rod protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Also known as
HCR
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X5
Exon count:
20
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) X5 NC_041753.1 (8193587..8204104)

Chromosome X5 - NC_041753.1Genomic Context describing neighboring genes Neighboring gene POU class 5 homeobox 1 Neighboring gene transcription factor 19 Neighboring gene psoriasis susceptibility 1 candidate 2 Neighboring gene corneodesmosin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041753.1 Chromosome X5 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Disruption and pseudoautosomal localization of the major histocompatibility complex in monotremes. Dohm JC, et al. Genome Biol, 2007. PMID 17727704, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coiled-coil alpha-helical rod protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041753.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    8193587..8204104
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029055907.1 → XP_028911740.1  coiled-coil alpha-helical rod protein 1 isoform X3

    UniProtKB/TrEMBL
    A7X5X4
    Conserved Domains (1) summary
    pfam07111
    Location:49 → 756
    HCR; Alpha helical coiled-coil rod protein (HCR)

  2. XM_029055902.1 → XP_028911735.1  coiled-coil alpha-helical rod protein 1 isoform X1

    Conserved Domains (1) summary
    pfam07111
    Location:178 → 896
    HCR; Alpha helical coiled-coil rod protein (HCR)

  3. XM_029055905.1 → XP_028911738.1  coiled-coil alpha-helical rod protein 1 isoform X3

    UniProtKB/TrEMBL
    A7X5X4
    Conserved Domains (1) summary
    pfam07111
    Location:49 → 756
    HCR; Alpha helical coiled-coil rod protein (HCR)

  4. XM_029055903.2 → XP_028911736.1  coiled-coil alpha-helical rod protein 1 isoform X2

    Conserved Domains (1) summary
    pfam07111
    Location:178 → 879
    HCR; Alpha helical coiled-coil rod protein (HCR)
Nucleotide Protein
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