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LOC100084843 myotonin-protein kinase-like [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100084843, updated on 30-Apr-2024

Summary

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Gene symbol
LOC100084843
Gene description
myotonin-protein kinase-like
See related
Ensembl:ENSOANG00000028407
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
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Genomic context

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See LOC100084843 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
15
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 5 NC_041732.1 (961214..973857, complement)

Chromosome 5 - NC_041732.1Genomic Context describing neighboring genes Neighboring gene meiosis initiator Neighboring gene SIX homeobox 5 Neighboring gene DM1 locus, WD repeat containing Neighboring gene radial spoke head 6 homolog A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041732.1 Chromosome 5 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actomyosin structure organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-threonine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myotonin-protein kinase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041732.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    961214..973857 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039912236.1 → XP_039768170.1  myotonin-protein kinase-like isoform X2

    Conserved Domains (2) summary
    pfam08826
    Location:524 → 584
    DMPK_coil; DMPK coiled coil domain like
    cd05597
    Location:69 → 399
    STKc_DMPK_like; Catalytic domain of Myotonic Dystrophy protein kinase (DMPK)-like Serine/Threonine Kinases

  2. XM_029065232.2 → XP_028921065.1  myotonin-protein kinase-like isoform X1

    Conserved Domains (2) summary
    pfam08826
    Location:529 → 589
    DMPK_coil; DMPK coiled coil domain like
    cl21453
    Location:69 → 404
    PKc_like; Protein Kinases, catalytic domain

  3. XM_029065233.2 → XP_028921066.1  myotonin-protein kinase-like isoform X3

    Conserved Domains (2) summary
    pfam08826
    Location:529 → 589
    DMPK_coil; DMPK coiled coil domain like
    cl21453
    Location:69 → 404
    PKc_like; Protein Kinases, catalytic domain

  4. XM_039912237.1 → XP_039768171.1  myotonin-protein kinase-like isoform X4

    Conserved Domains (2) summary
    pfam08826
    Location:441 → 501
    DMPK_coil; DMPK coiled coil domain like
    cl21453
    Location:69 → 296
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
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