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LOC100081169 chloride channel protein ClC-Ka-like [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100081169, updated on 30-Apr-2024

Summary

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Gene symbol
LOC100081169
Gene description
chloride channel protein ClC-Ka-like
See related
Ensembl:ENSOANG00000004166
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
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Genomic context

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See LOC100081169 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
20
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 5 NC_041732.1 (63056677..63073225, complement)

Chromosome 5 - NC_041732.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114812025 Neighboring gene family with sequence similarity 131 member C Neighboring gene small nucleolar RNA SNORA7 Neighboring gene heat shock protein family B (small) member 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041732.1 Chromosome 5 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables voltage-gated chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chloride channel protein ClC-Ka-like; chloride channel protein ClC-Kb-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041732.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    63056677..63073225 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029066690.1 → XP_028922523.1  chloride channel protein ClC-Kb-like isoform X4

    Conserved Domains (2) summary
    cd03683
    Location:32 → 491
    ClC_1_like; ClC-1-like chloride channel proteins. This CD includes isoforms ClC-0, ClC-1, ClC-2 and ClC_K. ClC-1 is expressed in skeletal muscle and its mutation leads to both recessively and dominantly-inherited forms of muscle stiffness or myotonia. ClC-K is ...
    cd04591
    Location:503 → 633
    CBS_pair_voltage-gated_CLC_euk_bac; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the voltage gated CLC (chloride channel) in eukaryotes and bacteria

  2. XM_029066689.1 → XP_028922522.1  chloride channel protein ClC-Kb-like isoform X3

    Conserved Domains (2) summary
    cd03683
    Location:49 → 492
    ClC_1_like; ClC-1-like chloride channel proteins. This CD includes isoforms ClC-0, ClC-1, ClC-2 and ClC_K. ClC-1 is expressed in skeletal muscle and its mutation leads to both recessively and dominantly-inherited forms of muscle stiffness or myotonia. ClC-K is ...
    cd04591
    Location:504 → 634
    CBS_pair_voltage-gated_CLC_euk_bac; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the voltage gated CLC (chloride channel) in eukaryotes and bacteria

  3. XM_029066688.1 → XP_028922521.1  chloride channel protein ClC-Kb-like isoform X2

    Conserved Domains (2) summary
    cd03683
    Location:49 → 531
    ClC_1_like; ClC-1-like chloride channel proteins. This CD includes isoforms ClC-0, ClC-1, ClC-2 and ClC_K. ClC-1 is expressed in skeletal muscle and its mutation leads to both recessively and dominantly-inherited forms of muscle stiffness or myotonia. ClC-K is ...
    cd04591
    Location:543 → 673
    CBS_pair_voltage-gated_CLC_euk_bac; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the voltage gated CLC (chloride channel) in eukaryotes and bacteria

  4. XM_029066687.1 → XP_028922520.1  chloride channel protein ClC-Ka-like isoform X1

    UniProtKB/TrEMBL
    F6UTV3
    Related
    ENSOANP00000006612.2, ENSOANT00000006614.3
    Conserved Domains (2) summary
    cd03683
    Location:49 → 534
    ClC_1_like; ClC-1-like chloride channel proteins. This CD includes isoforms ClC-0, ClC-1, ClC-2 and ClC_K. ClC-1 is expressed in skeletal muscle and its mutation leads to both recessively and dominantly-inherited forms of muscle stiffness or myotonia. ClC-K is ...
    cd04591
    Location:546 → 676
    CBS_pair_voltage-gated_CLC_euk_bac; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the voltage gated CLC (chloride channel) in eukaryotes and bacteria

  5. XM_029066691.1 → XP_028922524.1  chloride channel protein ClC-Kb-like isoform X5

    Conserved Domains (1) summary
    cd03683
    Location:49 → 534
    ClC_1_like; ClC-1-like chloride channel proteins. This CD includes isoforms ClC-0, ClC-1, ClC-2 and ClC_K. ClC-1 is expressed in skeletal muscle and its mutation leads to both recessively and dominantly-inherited forms of muscle stiffness or myotonia. ClC-K is ...
Nucleotide Protein
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