Vmn2r41 vomeronasal 2, receptor 41 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Vmn2r41provided by MGI
Official Full Name: vomeronasal 2, receptor 41provided by MGI
Primary source: MGI:MGI:3757876
See related: Ensembl:ENSMUSG00000090892 AllianceGenome:MGI:3757876
Gene type: protein coding
RefSeq status: INFERRED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary: Predicted to enable G protein-coupled receptor activity. Predicted to be integral component of plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression: Low expression observed in reference dataset See more
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Genomic context

Location:: 7 A1; 7 5.82 cM

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	7	NC_000073.7 (8140904..8164550, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	7	NC_000073.6 (8137905..8161551, complement)

Chromosome 7 - NC_000073.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables G protein-coupled receptor activity	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: vomeronasal 2, receptor 41

Names: vomeronasal receptor Vmn2r41

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001105073.1 → NP_001098543.1 vomeronasal 2, receptor 41 precursor

Status: INFERRED

Source sequence(s)

AC188457

Consensus CDS

CCDS57482.1

UniProtKB/TrEMBL

E9Q5C7, O35202

Related

ENSMUSP00000128337.3, ENSMUST00000168807.3

Conserved Domains (3) summary

pfam00003
Location:599 → 833

7tm_3; 7 transmembrane sweet-taste receptor of 3 GCPR

pfam07562
Location:513 → 564

NCD3G; Nine Cysteines Domain of family 3 GPCR

cl10011
Location:43 → 503

Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

NC_000073.7 Reference GRCm39 C57BL/6J

Range

8140904..8164550 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_017321895.1 → XP_017177384.1 vomeronasal 2, receptor 41 isoform X1

UniProtKB/TrEMBL

O35202

Conserved Domains (3) summary

cd15283
Location:551 → 786

7tmC_V2R_pheromone; vomeronasal type-2 pheromone receptors, member of the class C family of seven-transmembrane G protein-coupled receptors

pfam07562
Location:512 → 549

NCD3G; Nine Cysteines Domain of family 3 GPCR

cl10011
Location:43 → 503

Periplasmic_Binding_Protein_type1; Type 1 periplasmic binding fold superfamily