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Items: 1 to 20 of 26

1.

Tissue-specific transcriptomes reveal gene expression trajectories in two maturing skin epithelial layers in zebrafish embryos

(Submitter supplied) We purified (FACS) and profiled (RNA-Seq) zebrafish embryo skin cells vs. nonskin cells at three early developmental stages. At two of the stages, we further purified and profiled two distinct epithelial layers of the skin: the periderm and basal cells. Our comprehensive expression analysis provides the first reported transcriptomes of these two cell types, reveals gene expression dynamics in space and time, and identifies common and distinct features of epithelial maturation in the two layers. more...
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL18413 GPL14875
23 Samples
Download data: TAR, XLSX
Series
Accession:
GSE132304
ID:
200132304
2.

Illumina HiSeq 2500 (Danio rerio)

Platform
Accession:
GPL18413
ID:
100018413
3.

Illumina HiSeq 2000 (Danio rerio)

Platform
Accession:
GPL14875
ID:
100014875
4.

72 hpf, all skin, replicate B

Organism:
Danio rerio
Source name:
FACS-isolated all skin cells from whole embryos
Platform:
GPL18413
Series:
GSE132304
Download data: TAR
Sample
Accession:
GSM3855906
ID:
303855906
5.

72 hpf, all skin, replicate A

Organism:
Danio rerio
Source name:
FACS-isolated all skin cells from whole embryos
Platform:
GPL18413
Series:
GSE132304
Download data: TAR
Sample
Accession:
GSM3855905
ID:
303855905
6.

72 hpf, nonskin1, replicate B

Organism:
Danio rerio
Source name:
FACS-isolated nonskin cells from whole embryos
Platform:
GPL18413
Series:
GSE132304
Download data: TAR
Sample
Accession:
GSM3855904
ID:
303855904
7.

72 hpf, nonskin1, replicate A

Organism:
Danio rerio
Source name:
FACS-isolated nonskin cells from whole embryos
Platform:
GPL18413
Series:
GSE132304
Download data: TAR
Sample
Accession:
GSM3855903
ID:
303855903
8.

52 hpf, all skin, replicate B

Organism:
Danio rerio
Source name:
FACS-isolated all skin cells from whole embryos
Platform:
GPL18413
Series:
GSE132304
Download data: TAR
Sample
Accession:
GSM3855897
ID:
303855897
9.

52 hpf, all skin, replicate A

Organism:
Danio rerio
Source name:
FACS-isolated all skin cells from whole embryos
Platform:
GPL18413
Series:
GSE132304
Download data: TAR
Sample
Accession:
GSM3855896
ID:
303855896
10.

52 hpf, nonskin1, replicate B

Organism:
Danio rerio
Source name:
FACS-isolated nonskin cells from whole embryos
Platform:
GPL18413
Series:
GSE132304
Download data: TAR
Sample
Accession:
GSM3855895
ID:
303855895
11.

52 hpf, nonskin1, replicate A

Organism:
Danio rerio
Source name:
FACS-isolated nonskin cells from whole embryos
Platform:
GPL18413
Series:
GSE132304
Download data: TAR
Sample
Accession:
GSM3855894
ID:
303855894
12.

20 SS, all skin, replicate B

Organism:
Danio rerio
Source name:
FACS-isolated all skin cells from whole embryos
Platform:
GPL18413
Series:
GSE132304
Download data: TAR
Sample
Accession:
GSM3855893
ID:
303855893
13.

20 SS, all skin, replicate A

Organism:
Danio rerio
Source name:
FACS-isolated all skin cells from whole embryos
Platform:
GPL18413
Series:
GSE132304
Download data: TAR
Sample
Accession:
GSM3855892
ID:
303855892
14.

20 SS, nonskin1, replicate B

Organism:
Danio rerio
Source name:
FACS-isolated nonskin cells from whole embryos
Platform:
GPL18413
Series:
GSE132304
Download data: TAR
Sample
Accession:
GSM3855891
ID:
303855891
15.

20 SS, nonskin1, replicate A

Organism:
Danio rerio
Source name:
FACS-isolated nonskin cells from whole embryos
Platform:
GPL18413
Series:
GSE132304
Download data: TAR
Sample
Accession:
GSM3855890
ID:
303855890
16.

72 hpf, periderm, replicate B

Organism:
Danio rerio
Source name:
FACS-isolated periderm from whole embryos
Platform:
GPL14875
Series:
GSE132304
Download data: TAR
Sample
Accession:
GSM3855912
ID:
303855912
17.

72 hpf, periderm, replicate A

Organism:
Danio rerio
Source name:
FACS-isolated periderm from whole embryos
Platform:
GPL14875
Series:
GSE132304
Download data: TAR
Sample
Accession:
GSM3855911
ID:
303855911
18.

72 hpf, basal cells, replicate B

Organism:
Danio rerio
Source name:
FACS-isolated basal cells from whole embryos
Platform:
GPL14875
Series:
GSE132304
Download data: TAR
Sample
Accession:
GSM3855910
ID:
303855910
19.

72 hpf, basal cells, replicate A

Organism:
Danio rerio
Source name:
FACS-isolated basal cells from whole embryos
Platform:
GPL14875
Series:
GSE132304
Download data: TAR
Sample
Accession:
GSM3855909
ID:
303855909
20.

72 hpf, nonskin2, replicate B

Organism:
Danio rerio
Source name:
FACS-isolated nonskin cells from whole embryos
Platform:
GPL14875
Series:
GSE132304
Download data: TAR
Sample
Accession:
GSM3855908
ID:
303855908
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Supplemental Content

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