NCBI
National Center for
Biotechnology Information
Search
3HE7:
Crystal structure of mouse CD1d-alpha-galactosylceramide with mouse Valpha14-Vbeta7 NKT TCR
PDB ID:
3HE7
Download
MMDB ID:
75661
PDB Deposition Date:
2009/5/8
Updated in MMDB:
2012/12
Experimental Method:
x-ray diffraction
Resolution:
2.8 Å
Source Organism:
Mus musculus
Similar Structures:
VAST+
Download sequence data
Biological Unit for 3HE7: tetrameric; determined by author and by software (PISA)
Molecular Components in 3HE7
Label
Count
Molecule
Proteins (4 molecules)
A
1
Antigen-presenting Glycoprotein Cd1d1
(Gene symbol:
Cd1d1
)
B
1
Beta-2-microglobulin
(Gene symbol:
B2m
)
C
1
Valpha14(mouse Variable Domain, Human Constant Domain)
D
1
Vbeta7(mouse Variable Domain, Human Constant Domain)
Chemicals and Non-standard biopolymers (5 molecules)
1
4
2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
N-{(1S,2R,3S)-1-[(ALPHA-D-GALACTOPYRANOSYLOXY)METHYL]-2,3-DIHYDROXYHEPTADECYL}HEXACOSANAMIDE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303