2DNX


Conserved Protein Domain Family
SynN

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smart00503: SynN 
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Syntaxin N-terminal domain
Three-helix domain that (in Sso1p) slows the rate of its reaction with the SNAP-25 homologue Sec9p
Statistics
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PSSM-Id: 214699
Aligned: 26 rows
Threshold Bit Score: 64.6745
Created: 12-Jul-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2DNX_A      7 GQLRDFSSIIQTCSGNIQRISQATAQIKNLMSQLGTKQDS-SKLQENLQQLQHSTNQLAKETNELLK--ELGSLPL---P 80  human
O88385     15 RSLRDFSSIIQTCSGNIQRISQATAQIKNLMSQLGTKQDs-SKLQENLQQFQHSTNQLAKETNELLK--ELGSLPLplsA 91  Norway rat
NP_003560   6 GVGGDPTQLAQRISSNIQKITQCSVEIQRTLNQLGTPQDs-PELRQQLQQKQQYTNQLAKETDKYIK--EFGSLPTt--- 79  human
BAA84625   24 GAAAAGAGASQAVASGVFQINTAVSTFQRLVNTLGTPKDt-PDLRERIHKTRQHITQLVKDTSEKLK--QASEADHr--- 97  Oryza sativa Japon...
CAB04327   30 FNRDAGNETASQLQLNIQNLNQQVIQLESFITNLSDSSESgQRERELFNRKAHNAQELSKETNALLK--RLVVMSN---- 103 Caenorhabditis ele...
O94651     14 EQNGDFPALASSIAQEIHALRGNTAAIHRYLVNNLTK---------NLHEVLEQSRELSQKVRSDLV--RLANIKDtk-- 80  Schizosaccharomyce...
NP_524475  31 SYMDDFFAQVEEIRGMIDKVQDNVEEVKKKHSAILSAPQTdEKTKQELEDLMADIKKNANRVRGKLKgiEQNIEQEeqqN 110 fruit fly
AAA20967   36 SPDEEFFHKVRTIRQTIVKLGNKVQELEKQQVTILATPLPeESMKQELQNLRDEIKQLGREIRLQLK--AIEPQKEeadE 113 human
AAX29912   39 HILESLYRDIRDIQDENQLLVADVKRLGKQNARFLTSMRRlSSIKRDTNSIAKAIKARGEVIHCKLR--AMKELSEaaeA 116 synthetic construct
AAM66128   24 QRPSSRGDPSQEVAAGIFRISTAVNSFFRLVNSIGTPKDTl-ELRDKLQKTRLQISELVKNTSAKLK--EASEADLhgsA 100 thale cress
2DNX_A     81 L---STSEQRQQRLQKERLMNDFSAALNNFQAVQRRVSEKEK 119 human
O88385     92 ------SEQRQQKLQKERLMNDFSSALNNFQVVQRKVSEKEK 127 Norway rat
NP_003560  80 -----pSEQRQRKIQKDRLVAEFTTSLTNFQKVQRQAAEREK 116 human
BAA84625   98 -----vEVSASKKIADAKLAKDFQAVLKEFQKAQRLAVEREA 134 Oryza sativa Japonica Group
CAB04327  104 -------SDKNLRGVRERLQNEYIGVLNRLQASQRKAAQTEK 138 Caenorhabditis elegans
O94651     81 ------yGEEASSFALSKLTRDFNTVLAELQRVQQKCAQQES 116 Schizosaccharomyces pombe 972h-
NP_524475 111 K---SSADLRIRKTQHSTLSRKFVEVMTEYNRTQTDYRERCK 149 fruit fly
AAA20967  114 Ny--NSVNTRMRKTQHGVLSQQFVELINKCNSMQSEYREKnv 153 human
AAX29912  117 QhgpHSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCK 158 synthetic construct
AAM66128  101 S--------QIKKIADAKLAKDFQSVLKEFQKAQRLAAEREi 134 thale cress
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