1T4Z,1R5P


Conserved Protein Domain Family
KaiB

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pfam07689: KaiB 
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KaiB domain
The cyanobacterial clock proteins KaiA and KaiB are proposed as regulators of the circadian rhythm in cyanobacteria. Mutations in both proteins have been reported to alter or abolish circadian rhythmicity. KaiB adopts an alpha-beta meander motif and is found to be a dimer.
Statistics
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PSSM-Id: 400160
Aligned: 12 rows
Threshold Bit Score: 94.3032
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1T4Z_A            16 QLFVDTRPLSQHIVQRVKNILAAVEATVPISLQVINVADQPQLVEYYRLVVTPALVKIGPGSRQVLSGIDLTDQLANQLP 95  Synechococc...
jgi:Cal7507_0016 221 RLFVAGHSANTERILHNLHELLERSLGHPYTLKVVDVLTNPEQAEIDQVSATPTLVKVWPHPIRRIVGDLDHAEKILQML 300
Q55630            18 LLFIDDRPNSQDSVQEIGQCLTNLLDGHSHDLQILQISKHPHLVEHFRLVATPSLIKLQPEPRQVLAGSNIIQQLQKWWP 97  Synechocyst...
Q7V6P7            15 LLVAARHQLSRSDLRSMIQFLENEDCGFNVTLQMADPSEQPELLELHRLVATPALIKLSPTPKQVFAGSSIFQQLQNWIT 94  Prochloroco...
Q7BWI3            15 LLVASRKHLSRGDLRSLIRFLESEDCGFEIKLQFSDPKEQPELLELHRLVAIPALIKLDPQPKQIFAGTSILEQLKNWLP 94  Prochloroco...
Q8DLE2           186 RLYVRGETHAAEVALKNLHDLLSSALKVPYTLKVVDVTKQPDLAEKDQVQATPTLVRVYPQPVRRLVGQLDHRYRLQHLL 265 Synechococc...
Q8DMT2            20 LLFVANRPGDEEETAAIQAHIQQLPSNFSFELKVVPIGEQPYLLEEYKLVATPALIKVRPEPRQTLAGRKLLQKVDYWWP 99  Thermosynec...
Q8YR50            24 LLFVDGRPKSKQQVQRIRAYLKDLQAEYNFELQIIDVGQQPYLAEHFKLVATPALIKIHPEPRQILAGSNIITQLKNLWP 103 Nostoc sp. ...
1R5P_B            11 KLYVAGNTPNSVRALKTLKNILEQEFQGIYALKVIDVLKNPQLAEEDKILATPTLSKILPPPVRKIIGDLSDRERVLIGL 90  Nostoc sp. ...
P73859            19 RLYVAGQTPKSVTAFINLKKICEEYLNGQYQIEIIDLTQQPELAIEDSILALPTLVRKLPEPIKKIIGDLSNTEKVLVGL 98  Synechocyst...
Q55819             9 RLYITGNSVRSQQAIANIYRICQEDLGDQYNVEIIDVLEQPQRAEEEKIMVTPTLIKQLPPPLQRIIGDMSNTEKVLLGL 88  Synechocyst...
O27167             8 ALYVTGDSLS-ERALENLMDVIDD----RVELEVVNVLEKPWLARERGIIAIPTLERLNPGPERRVIGDLSDADALRRFL 82  Methanother...
1T4Z_A            96 Q 96  Synechococcus elongatus PCC 7942 = FACHB-805
jgi:Cal7507_0016 301 G 301
Q55630            98 R 98  Synechocystis sp. PCC 6803 substr. Kazusa
Q7V6P7            95 R 95  Prochlorococcus marinus str. MIT 9313
Q7BWI3            95 R 95  Prochlorococcus marinus subsp. marinus str. CCMP1375
Q8DLE2           266 S 266 Synechococcus elongatus
Q8DMT2           100 R 100 Thermosynechococcus vestitus BP-1
Q8YR50           104 R 104 Nostoc sp. PCC 7120 = FACHB-418
1R5P_B            91 D 91  Nostoc sp. PCC 7120 = FACHB-418
P73859            99 Q 99  Synechocystis sp. PCC 6803 substr. Kazusa
Q55819            89 D 89  Synechocystis sp. PCC 6803 substr. Kazusa
O27167            83 G 83  Methanothermobacter thermautotrophicus str. Delta H
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