Conserved Protein Domain Family
RP-C

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pfam03428: RP-C 
Replication protein C N-terminal domain
Replication protein C is involved in the early stages of viral DNA replication.
Statistics
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PSSM-Id: 427291
Aligned: 36 rows
Threshold Bit Score: 145.46
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CCD31929                  13 PLSLAMVEVQATTRDFaakPdASetvVHKWRLFRALTEAKGPLGVTDRALSVLHALLSFHQETALTlPEGdggdgegdsp 92 
goetting:OCA5_pHCG300030  10 rsspktFSAEKFARTYregKaPA---VTRTAALQVAKRSAAAMGLKAAKLALIDQLFAASKSVDWStPGR---------- 76 
Q11MP7                    21 RITPAGLAAHRAARDYagdRtLA---VKRIEALQLAKRAAAALGLKAAKIAMIDKLFGYSPAADWTcKDA---------- 87  Che...
jgi:Bind_3847             16 RISPAMLAFRETADTYqglPdGS---LKPFQFLTAFQQALPYLRLPPKAFELVAWLFDMTHACDWQ-QGS---------- 81 
WP_011930436              20 KLTPKMLETIEVAETHrftSe-----MLPGQVLAAFKAAAPHLGLRPSVVHAIDWLFRFTNAVDWQ-PSS---------- 83  Aci...
jgi:Acry_3518             43 RLTPAMLPTGRLADEFaggD------VTPGQALAAFKAAAPFLGIGPRAAQAIDWLFRFTQPQDWQ-PGA---------- 105
WP_011930733              22 RLTLGMVATERLADDFgtlSeGGq--VDPGRVLAAFKAAAPYLRFGPRVTQAIDWLFRFTQVQDWQ-EGA---------- 88  Aci...
jgi:Acry_3578             23 rLSLAMIATDRTAEGFtglSdGA---GGPGAVLAAFKAAAPYLGLPPRVVHAVDWLFRFTQRQDWE-PGA---------- 88 
jgi:Oant_4539             14 KQTPQRTEFRRLAQTAeigM------VTRGQLIRLAQSLPCLGLINGTEAHLLVVLINTAPAESYD-KGG---------- 76 
WP_012653079              14 RMTKERAEFRRLAQSTevgT------VTRGQLAVLSQSLPCTGLITSTESHLLTVIVNTARADAFD-TGG---------- 76  Agr...
CCD31929                  93 apGIVVFPSNRELSiRAHGMAPATLRRHLASLVEAGLIIRRDSPNGKRFARRGKGGEIAEAFGFDLAPLIARAAEIENLA 172
goetting:OCA5_pHCG300030  77 --PPIVWPSNARLA-RSLGLSISTMKYHLKGLVEAGLVAYSDHPTYQRRGRRDAEGNIVEAYGIDLSPIATRFAELHQLA 153
Q11MP7                    88 --SPIVWPSNEALA-RQLGLSISTARHHLRGLAAAGLIAHASHPTYQRRGVRDDQGKIVEAFGIDLSPIIMRYDELLEIA 164 Che...
jgi:Bind_3847             82 --KPIAWPSARLQQ-EYLGLSAARVKVLNRALFEAGIFVIRDNAEGKRYGQRGPDGRILQAFGFDLSPLAQRYAEFLRIA 158
WP_011930436              84 --RPIVWPSAIMQQ-QELGLGPSQVKNLNRHLVELGLVVMKDSPNGKRYGRRDSKGRIIEAYGFDLSPLASRFTEFRAVA 160 Aci...
jgi:Acry_3518            106 --RPIVWPSAAMMA-AELGITETQTKRLNRHLAELGVVTMRDSPNGKRYGHRDRSGRIIEAYGFDLSPIAQRIEEFRALA 182
WP_011930733              89 --RPIVWPSAAMQM-EALCLSEAQVKRLNRLLAHLGLITMRDSPNGKRYGRRDPRGRIVEAYGFDLSPIAVRQAEFREIA 165 Aci...
jgi:Acry_3578             89 --RPVVWPSATVQQ-ADLDLGVSQTKALNRLLVELGLVVMRDSPNGKRYGRRDRSGRIIEAYGFDLSPLGVRLEEFRAVA 165
jgi:Oant_4539             77 --RPIVFKSNAALA-FEIGRSEGRVSRVLSRLFDAGVITMQDSGNYKRYPVRDGDASIADACGIDLRVLIARFAELDGMV 153
WP_012653079              77 --RPIVFKSNNQLG-FEINRSPGRVSRILSRLFDAGLVTMQDSANFKRYPIRDGEGELSDACGIDLRVLIARYRELDALV 153 Agr...
CCD31929                 173 EEVRVENRAIALLREKITLLRRDIAKMIETGM 204
goetting:OCA5_pHCG300030 154 ENAEYEAREWRRLSYRRTIMRKEIQSLIVTAG 185
Q11MP7                   165 LAYEQEGRERRTLSYQRTQIRREIEAVLVAAe 196 Chelativorans sp. BNC1
jgi:Bind_3847            159 EEAKIERALVRSCRRQLTLVRKAILQAeailk 190
WP_011930436             161 EEGREERARLQALKRRATIARNGIRQLLDTAV 192 Acidiphilium cryptum
jgi:Acry_3518            183 EAGREERAAVAKLRRRASIARASLRQTWETFR 214
WP_011930733             166 ERGRARFEALKQLRRRATIAVRGIQQIVETAA 197 Acidiphilium cryptum
jgi:Acry_3578            166 EKGRAEREAVRQLRRRVTIARKAIEQIAETAV 197
jgi:Oant_4539            154 RQAKAEKKALNANLRRYRGAVRNLRYALASMe 185
WP_012653079             154 RQKREEKRANDAAARRFRAALRSARFALmnaa 185 Agrobacterium vitis
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