4JC0


Conserved Protein Domain Family
UPF0004

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pfam00919: UPF0004 
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Uncharacterized protein family UPF0004
This family is the N terminal half of the Prosite family. The C-terminal half has been shown to be related to MiaB proteins. This domain is a nearly always found in conjunction with pfam04055 and pfam01938 although its function is uncertain.
Statistics
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PSSM-Id: 459997
Aligned: 110 rows
Threshold Bit Score: 73.3144
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4JC0_A           2 RVGIKVLGCPKNEADCEVLAGVLREGGHEIVFDVKDADVVVLDTCAFIEDAKRESIDEIFSFVDAKdQyGYKLVVKGCLV 81 
Q9WZT7           3 TVRIETFGCKVNQYESEYMAEQLEKAGYVVLPDG-NAAYYIVNSCAVTKEVEKKVKRLIKSIRNRN-K-NAKIILTGCFA 79  Thermotoga ma...
WP_011722554     2 KVAFATLGCRVNMYESEAMAEKFIKNGYEVVEFDEMADVYVVNTCTVTNMSDKKSRQMLSRAKRKN-P-ESIIAAVGCYT 79  Clostridium n...
WP_012200314    22 KVAFLTLGCKVNSYETEAMQQLFLDAGATIVDFEELSDIYVVNTCTVTNIADRKSRQMLHKAKKNN-P-NSVVIAVGCYV 99  Lachnoclostri...
WP_012514598     2 KFKVINLGCRMNQFDGDFISSWLLKHGYEK---SEIPDIYIINTCSVTSQADRSSRQAIYQAKKEN-P-NAIVIATGCYA 76  Hydrogenobacu...
O66772           2 KVAFETLGCRMNQFDTDLLKNKFIQKGYEVVSFEDMADVYVINTCTVTVGGDRSSRQAIYQAKRRN-P-KAIVVATGCYA 79  Aquifex aeoli...
jgi:Krodi_2149   6 KVAFYTLGCKLNFSETSTIARSFGQEGFDKVEFSEPADVYVINTCSVTENADKRFKSIVKQAQKVN-P-EGVTVAVGCYA 83 
Q5L9C0          11 tavYYTLGCKLNFSETSTIGKILREAGVRTARKGEKADLCIVNTCSVTEMADKKCRQAIHRLVKQH-P-GAFVVVTGCYA 88  Bacteroides f...
Q8F909           9 tVLFNTLGCRLNFFESDGLFASLSKHGYRSAKSEEHPEVVIINTCTVTNKADSKNRNTIRNAIKKF-P-GSQIWVTGCYA 86  Leptospira in...
WP_003531831     2 KAYILTLGCKVNQYESQAMLEELCRSGFAPAETEEEADVVILNSCTVTAASDQKMRKLLHRARRKN-P-QALLVLTGCMP 79  [Clostridium]...
4JC0_A          82 QRYYEELKKEIPEVDQWIG 100
Q9WZT7          80 QLSPDEAKNLPV--DMVLG 96  Thermotoga maritima MSB8
WP_011722554    80 QIAPEKVKEIGDv-DVILG 97  Clostridium novyi
WP_012200314   100 QAAKEALLEDDTv-DLVIG 117 Lachnoclostridium phytofermentans
WP_012514598    77 QTQKEALEKIKEv-DIVLG 94  Hydrogenobaculum sp. Y04AAS1
O66772          80 QVNPQELAKLKEv-DLVVG 97  Aquifex aeolicus VF5
jgi:Krodi_2149  84 QLKPEELADVDG-VDLVLG 101
Q5L9C0          89 QLKPGDVAKIEG-VDVVLG 106 Bacteroides fragilis NCTC 9343
Q8F909          87 ETDRESIEAIPGV-AGVVg 104 Leptospira interrogans
WP_003531831    80 QAFPEEAAKLPE-PDLVLG 97  [Clostridium] innocuum
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