3BOV,3BP5


Conserved Protein Domain Family
IgV_PD-L2

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cd20983: IgV_PD-L2 
Immunoglobulin Variable (IgV) domain of Programmed death ligand 2 (PD-L2)
The members here are composed of the immunoglobulin variable (IgV) domain of Programmed death ligand 2 (PD-L2; also known as B7-DC or CD273). Receptor-binding domain of PD-L2 is a cell-surface ligand that competes with PD-L1 for binding to the immunosuppressive receptor programmed death-1 (PD-1). PD-1 is a member of the CD28/B7 family that plays an important role in negatively regulating immune responses upon interaction with its two ligands, PD-L1 or PD-L2. PD-L2 has a higher affinity for PD-1 but is expressed at lower levels. PD-L2 interaction with PD-1 suppresses T cell proliferation, cytokine production and cytotoxic activity. PD-L2 is expressed on tumor cells, antigen-presenting cells or APCs (such as macrophages, B cells and dendritic cells), and a variety of other immune and nonimmune cells. Tumor expression of PD-L2 may contribute to tumor evasion of immune destruction by inactivating T cells. Thus, PD-L2 is a negative predictor for prognosis among solid cancer patients.
Statistics
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PSSM-Id: 409575
Aligned: 8 rows
Threshold Bit Score: 200.104
Created: 4-Nov-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 18 residues -Click on image for an interactive view with Cn3D
Feature 1:Receptor-Ligand Binding Site [polypeptide binding site]
Evidence:
  • Structure:2BP5; A binding interface formed by the front beta-sheets of both the mouse PD-1 and PD-L2 IgV domains, contacts by 4A
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:

Feature 1        ###  #  #                           #   #      #                                
3BOV_A         2 LFTVTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQ 81  house mouse
3BP5_B         2 LFTVTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQ 81  house mouse
NP_079515     20 LFTVTVPKELYIIEHGSNVTLECNFDTGSHVNLGAITASLQKVENDTSPHRERATLLEEQLPLGKASFHIPQVQVRDEGQ 99  Homo sapiens
EHH57412      20 LFTVTVPKELYIIEHGSNATLECNFDTGSHVNLGAITASLQKVENDTSPHRERATLLEEQLSLGKALFHIPQVQVRDEGQ 99  Macaca fascicularis
JAA40342      20 LFTVTVPKELYIIEHGSNVTLECNFDTGSHVNLGAITASLQKVENDTSPHCERATLLEEQLPLGKALFHIPQVQVRDEGQ 99  Pan troglodytes
AGC23358      19 LFTVMVSQELYTVDYGSNVTLECNFDTEGHVELKDLRASLQKVENNTSLHSERATLLEEHLSLGKALFHIPRVQVSDAGQ 98  Felis catus
XP_011980212  31 LFTVTVPKEMYMVDYGSNVTLECDFDTGGPVELGILKASLQKVENDTVLLSERATLLEEQLPLGKALFLIPRIQLKDAGQ 110 Ovis aries
XP_027298376  20 LFTVTVPKEVYTVEFSSNASLECDFDLSECTELGEIRASLQKVENDTSSLSERATLLEEALPLGKALFHIPSVHLRDAGQ 99  Cricetulus griseus

Feature 1         # # # #### ###     
3BOV_A        82 YRCLVICGAAWDYKYLTVKV 101 house mouse
3BP5_B        82 YRCLVICGAAWDYKYLTVKV 101 house mouse
NP_079515    100 YQCIIIYGVAWDYKYLTLKV 119 Homo sapiens
EHH57412     100 YQCIIIYGVAWDYKYLTLKV 119 Macaca fascicularis
JAA40342     100 YQCIIIYGVAWDYKYLTLKV 119 Pan troglodytes
AGC23358      99 YRCLIIYRVAGDYKYLTLKV 118 Felis catus
XP_011980212 111 YRCLIIYGIAWDYKYLALKV 130 Ovis aries
XP_027298376 100 YRCLVICGAAWDYKYLTVKV 119 Cricetulus griseus

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