3BJI,2VRW,3KY9


Conserved Protein Domain Family
C1_VAV1

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cd20867: C1_VAV1 
protein kinase C conserved region 1 (C1 domain) found in VAV1 protein
VAV1 is expressed predominantly in the hematopoietic system and plays an important role in the development and activation of B and T cells. It is activated by tyrosine phosphorylation to function as a guanine nucleotide exchange factor (GEF) for Rho GTPases following cell surface receptor activation, triggering various effects such as cytoskeletal reorganization, transcription regulation, cell cycle progression, and calcium mobilization. It also serves as a scaffold protein and has been shown to interact with Ku70, Socs1, Janus kinase 2, SIAH2, S100B, Abl gene, ZAP-70, SLP76, and Syk, among others. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. This model corresponds to the C1 domain. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.
Statistics
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PSSM-Id: 410417
Aligned: 8 rows
Threshold Bit Score: 130.071
Created: 7-Oct-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding site
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:H C C C C H C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:Two non-consecutive sets of zinc-binding residues form two separate metal-binding sites.
  • Structure:3BJI; Homo sapiens VAV1 binds two Zn2+ ions.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              #            #  #             #  #    #  #      #  
3BJI_A       322 NATANGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRVPPCGG 378 human
2VRW_B       341 NATANGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVPPCGR 397 house mouse
3KY9_A       513 NATANGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRVPPCGR 569 human
P15498       510 NATANGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRVPPCGR 566 human
NP_001086991 512 NALANGHDFQMFSFEDTATCKACQMLLRGLFFQGYRCCRCKAPAHKECLGRVPCCGK 568 African clawed frog
XP_006003732 448 NSMANGHDFQMYSFEDTASCKACQMLLRGTFFQGYRCTRCKVPAHKECLGRVPLCGK 504 coelacanth
KYO37560     480 NATANSHDFQMYSFEETASCKACQMLLRGIFYQGYRCSRCRAPAHKECLGRVPPCGK 536 American alligator
RXN32683     273 NGTANGHDFQMHCFEDTTSCKACQMLLRGIFYQGYRCSRCKMAAHKECLGRVPACGR 329 rohu

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