Conserved Protein Domain Family
CYCLIN_AcCycL_rpt2

?
cd20594: CYCLIN_AcCycL_rpt2 
second cyclin box found in Arabidopsis thaliana L-type cyclins (CycL) and similar proteins
Cyclin-L1-1 (CycL1), also called arginine-rich cyclin 1 (AtRCY1), or protein MODIFIER OF SNC1 12, is the cognate cyclin for cyclin-dependent kinase G1 (CDKG1). It is involved in regulation of DNA methylation and transcriptional silencing. It is required for synapsis and male meiosis, and for the proper splicing of specific resistance (R) genes. L-type cyclins contain two cyclin boxes. This model corresponds to the second one. The cyclin box is a protein binding domain.
Statistics
?
PSSM-Id: 410297
Aligned: 5 rows
Threshold Bit Score: 194.311
Created: 10-Jul-2019
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q8RWV3       150 HVEHPHKFISNYLATLet-----pPELRQEAWNLANDSLRTTLCVRFRSEVVACGVVYAAARRfqvpLPENPPWWKAFDa 224 thale cress
EFJ21717     103 HVEHPHKFVLNYLLQLka-----pLELIQEGWNLANDSLRTTLCVRFKSEVVACGVVYAAARRfrypLPENPPWWLIFQa 177 Selaginella moe...
XP_024385277 136 HVEHPHKFIISYLKVLaa-----pSELMQVAWNLANDSLRSTLCVRFKSEVVACGVVYAAARKf--kVPLPDRWWEVFDa 208 Physcomitrella ...
PSC71895      76 HVEHPHRFILNYCQMLmkpsderqHALQQEAWNMANDSLRTTLCVRYRAEAVACGILFTAARKlqisLPEDPPWWALFEv 155 Micractinium co...
AIU51042      56 HVEHPHKFILNYLALLg------aPEIRQEAWNLANDSLRRTLCVRFKSEVVACGVVYAAARRfnvpLPENPPWWKVFDa 129 maidenhair tree
Q8RWV3       225 DKSSIDEVCRVLAHLYSLPKAQYISV 250 thale cress
EFJ21717     178 DKAEIDVVCKVLALLYQQPKAHYVDV 203 Selaginella moellendorffii
XP_024385277 209 EWSDVQVVCKVLAELYKQPKGYYIEV 234 Physcomitrella patens
PSC71895     156 KEAELVDVCRTLCDLYRQPRARHLPV 181 Micractinium conductrix
AIU51042     130 EKCEIDEVCKVLANLYRQPKARYIEV 155 maidenhair tree
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap