Conserved Protein Domain Family
Tudor_AtTudor1-like

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cd20443: Tudor_AtTudor1-like 
Tudor domain found in Arabidopsis thaliana ribonuclease Tudor 1 (AtTudor1), ribonuclease Tudor 2 (AtTudor2), and similar proteins
The family includes AtTudor1 (also called Tudor-SN protein 1) and AtTudor2 (also called Tudor-SN protein 2 or 100 kDa coactivator-like protein). They are cytoprotective ribonucleases (RNases) required for resistance to abiotic stresses, acting as positive regulators of mRNA decapping during stress. Members of this family contain one Tudor domain. The Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.
Statistics
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PSSM-Id: 410514
Aligned: 8 rows
Threshold Bit Score: 182.666
Created: 30-Mar-2007
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
putative
Feature 1:putative peptide binding site [polypeptide binding site]
Evidence:
  • Comment:based on the structures of other Tudor-like family proteins with bound methylated/dimethylated peptides
  • Comment:In general, the Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                            #      #                     
Q8VZG7        747 GGRFYVQSAGDqkiasIQNQLASLSIKDAPii-----gsFNPKRGDIVLAQFslDNSWNRAMIVTAPRaavq-spdEKFE 820  thale cress
CAL38976      746 GGKFYVQIVADqrvssIQQQLSGLSLQDKPsv------gFNPKKGDIVLAQFsaDDSWNRAMVVNAPRggsiaspkDEFE 819  Norway spruce
Q9FLT0        743 GGRFYVQTVGDqkvasIQNQLAALSLKDAPii-----gsFNPKKGDIVLAQFslDNSWNRAMIVNGPRgavq-speEEFE 816  thale cress
XP_024390706  749 GGKFYVQTEEAkv-lmIQKTLEGLNLKDKAspp----gvFTPQKGELVIAQFssDNSWNRALIVNSPRqgtaitakSLYE 823  Physcomitrell...
EFJ35031      714 GGSFYVQEVSDtrassIQQQLESLSLSEKAap-----agFTPERGQLVLANY--DGAWYRGLVVNAPKag-----kGEYE 781  Selaginella m...
GAQ90229      752 GSRFYAQVESDsrlssIEAQLEGLKLKEKVlpa----gaFAPKRGELVLGQFtlDDSFARALIVEAPKqatg-tggDKYE 826  Klebsormidium...
GBG64549      792 GGCVYGQVVGAgtlasIEQELARLQLNDKApppq--ppvFRPKKGDLVLCQFsaDNSWSRGMVVNVVNdpas-griRSCE 868  Chara braunii
PIL96445      186 VDNFFVQDPSSadlqsVMTTLGKYGTEGSSnledtytpgGLPRKGEVVICKFsaDNLWYRGRVDGRDSsg----kePQIS 261  Toxoplasma go...
Feature 1           #  # #                                    
Q8VZG7        821 VFYIDYGNQETVPYSAIRPIDPSVSa--aPGLAQLCRLAYIKVP 862  thale cress
CAL38976      820 VFYIDYGNQETVIYSKLRPLDPSVSs--aPGLAQLCSLAYIKVP 861  Norway spruce
Q9FLT0        817 VFYIDYGNQEIVPYSAIRPVDPSVSs--aPGLAQLCRLAYIKVP 858  thale cress
XP_024390706  824 VFYIDYGNQESIPLSRLRPLDPSVSsp-aQGLAQLCRLAHIRVP 866  Physcomitrella patens
EFJ35031      782 VFYIDYGNQEVVPLSQLRPIDPSVAg--tPGLAQWCSLAHVRVP 823  Selaginella moellendorffii
GAQ90229      827 VFYVDYGNKETLPVSRLRPMEPGLAa--vPQQSHLCSLAHVKVP 868  Klebsormidium nitens
GBG64549      869 IFYVDYGNQETVSFDRLRPLEGILAs--sPPQCVLCSLAHIKVP 910  Chara braunii
PIL96445      262 VFYIDFGNRETLPLHAVRRCPDTVStnkfPPQAKQCCLSGLLPP 305  Toxoplasma gondii COUG

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