Conserved Protein Domain Family
DEXHc_Mot1

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cd17999: DEXHc_Mot1 
DEXH-box helicase domain of Mot1
Modifier of transcription 1 (Mot1, also known as TAF172 in eukaryotes) regulates transcription in association with TATA binding protein (TBP). Mot1, Ino80C, and NC2 function coordinately to regulate pervasive transcription in yeast and mammals. Mot1 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
Statistics
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PSSM-Id: 350757
Aligned: 14 rows
Threshold Bit Score: 356.276
Created: 3-Feb-2014
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
ATP bindingDEAD box
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Comment:based on the structure of Saccharomyces cerevisiae Chd1 with bound gamma-thio-ATP

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                 #######                                            # 
EGG15746  1315 LRKYQQDGVNWLAflnkyQLHGILCDDMGLGKTLQTICIVAGDDydraqqfklhgtpnfqplpSLVICPSTLVGHWVSEI 1394 Dictyostelium fa...
EED47067  1074 LRPYQQEGVNWLAflnryNLHGILCDDMGLGKTLQTICIVASDHhlraeefartqapevrklpSLIVCPPSLSGHWQQEI 1153 Aspergillus flav...
417308    1272 LRKYQQDGVNWLAflnkyHLHGILCDDMGLGKTLQTICIIASDQylrkedyektrsvesralpSLIICPPSLTGHWENEF 1351 baker's yeast
EGG04881  1512 LRKYQREGISWLAflakyQLHGVLCDDMGLGKTLQSICILASKHheraelhkqtksldtvhlpSLVVCPPTLTGHWAHEI 1591 Melampsora laric...
O43065    1358 LRKYQQEGVNWLAflnkyELHGILCDDMGLGKTLQTICIVASDHynrqklfeesgspkfahvpSLIVCPSTLAGHWQQEL 1437 Schizosaccharomy...
AEE79208  1482 LRRYQQEGINWLGflkrfKLHGILCDDMGLGKTLQASAIVASDAaerrgst-----deldvfpSIIVCPSTLVGHWAFEI 1556 thale cress
EFV58334  1091 LRPYQKEGVTWLTflknySLHGILSDEMGLGKTLQTLCILYMAQrmssnnnnneekvnstnnvSLILCPKTLVKHWVAEA 1170 Trichinella spir...
CCA13893  1117 LRDYQQDGINWLSfliryNLHGILADDMGLGKTLQMLAAIVLCFqklsssp------npeplvALVICPPIVATHWALEA 1190 Albugo laibachii...
CAB02491  1102 LREYQLEGITWIRflrtyGLHGILADDMGLGKTLQTMCSIALSVdrdems--------efhrcSLIVCPRTLVDHWCLEW 1173 nematode
ADY40099  1100 LRPYQQEGIRWMSfleeyGLSGILADDMGLGKTLQALCLLALKVagkp------------aakVLIVCPPTLVGHWCAEW 1167 pig roundworm
Feature 1                                                                         ##           
EGG15746  1395 KKftdn----eqmRPLAYYGPpndraal-----rqqfhkhNVLIMSYEVVRNdiehlaaltFNYCILDEGHIIKntkTKM 1465 Dictyostelium fa...
EED47067  1154 KQyap------flKCVAYVGPpverarl-----kgslgdaDIVITSYDICRNdsdvitplnWNYCVLDEGHLIKnpkAKV 1222 Aspergillus flav...
417308    1352 DQyap------flKVVVYAGGptvrltl-----rpqlsdaDIIVTSYDVARNdlavlnkteYNYCVLDEGHIIKnsqSKL 1420 baker's yeast
EGG04881  1592 KTyas------klKPLLYVGGpqerssl-----vkkikkhDVVIMSYDIVRNdieqlskvsWNYCILDEGHIIKnakSKL 1660 Melampsora laric...
O43065    1438 STyap------flKVSAYVGPpaeraki-----rskmkksDVVVTSYDICRNdvdelvkidWNYCVLDEGHVIKnarAKL 1506 Schizosaccharomy...
AEE79208  1557 EKyidl----sllSVLQYVGSaqdrvsl-----reqfnnhNVIITSYDVVRKdvdyltqfsWNYCILDEGHIIKnakSKI 1627 thale cress
EFV58334  1171 NKffghctadfyvTTLDFDNVeel-------------ekcNVLVASYESLRRenellfdkhWFYCILDEGHVIRnhkTQL 1237 Trichinella spir...
CCA13893  1191 RKrfan----afdDIIEYSGTsatrrqlrkqldphfgpnkRLIVASYAVIRTeieywkekfFTFLVLDEAHLIRntkSCA 1266 Albugo laibachii...
CAB02491  1174 NRffpqr-vpaskNLTRCHGA-------------------EICVIAYDELKTaymm--drvWNYIVLDEGHVMRnskLRA 1231 nematode
ADY40099  1168 SKyfp------glAPFHKVNEgikdrrs-----lamsscqFATVASYNTIRAcsyf-qeidWYYVILDEGHAIRnpmTQI 1235 pig roundworm
Feature 1                                                                                      
EGG15746  1466 TKAVKQINaNHRLILSGTPIQNnvlELWSLFDFLMPGFLGTerqfeelyskpilaskdpkctakdqeagalameaLHRQV 1545 Dictyostelium fa...
EED47067  1223 TLAVKRVAsNHRLILSGTPIQNnvlELWSLFDFLMPGFLGTekvfldrfakpiaasrfskssskeqeagalaieaLHKQV 1302 Aspergillus flav...
417308    1421 AKAVKEITaNHRLILTGTPIQNnvlELWSLFDFLMPGFLGTekmfqerfakpiaasrnsktsskeqeagvlaleaLHKQV 1500 baker's yeast
EGG04881  1661 SKAVKMLKaNHRLILSGTPIQNnalELWSLFDFLMPGFLGTekyfnerfgrpismsrdaksstkeqeagalaleaLHKQV 1740 Melampsora laric...
O43065    1507 TKAVKSLRsYHRLILSGTPIQNnvlELWSLFDFLMPGFLGTektfqerfvrpiaasrdakssskerergtlaleaIHKQV 1586 Schizosaccharomy...
AEE79208  1628 TAAVKQLKaQHRLILSGTPIQNnimELWSLFDFLMPGFLGTerqfqasygkpllaardpkcsakdaeagvlameaLHKQV 1707 thale cress
EFV58334  1238 FKAALQIHaEHRLILTGTPVQNsvgELWSLFEFLMPGYLGTlqqfqqrylkpicqsrdskatsaeahagkkaledLHKQV 1317 Trichinella spir...
CCA13893  1267 FAAMVQLHaRHRFALTGTPIQNqvaDLWSLFQILMPGYLGPianfrrsfvnpitqsrnknanakqkelaalaitqLHDRV 1346 Albugo laibachii...
CAB02491  1232 WKFASQLVgKSRLILSGTPVQNspaDLWSLFAWLMPGYLGSekqfrsqflkkimkcrlpkaneadlkagsaaisqLHKLV 1311 nematode
ADY40099  1236 FKSVTSLRaQNRLVLSGTPVQNtpaDLWALFQFLMPGYLGSmkqfkvtflkainacrsvnasakeiqdgqnaldrLHKAV 1315 pig roundworm
Feature 1             
EGG15746  1546 LPFLLRR 1552 Dictyostelium fasciculatum
EED47067  1303 LPFLLRR 1309 Aspergillus flavus NRRL3357
417308    1501 LPFMLRR 1507 baker's yeast
EGG04881  1741 LPFLLRR 1747 Melampsora larici-populina 98AG31
O43065    1587 LPFMLRR 1593 Schizosaccharomyces pombe 972h-
AEE79208  1708 MPFLLRR 1714 thale cress
EFV58334  1318 LPFILRR 1324 Trichinella spiralis
CCA13893  1347 SPFILRR 1353 Albugo laibachii Nc14
CAB02491  1312 LPFVMRR 1318 nematode
ADY40099  1316 LPFVLRR 1322 pig roundworm

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