2PLG


Conserved Protein Domain Family
T3SC_YbjN-like_1
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cd17036: T3SC_YbjN-like_1 
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T110839 is structurally similar to type III secretion system chaperones and YbjN family proteins
This family includes protein T110839 from Synechococcus elongatus that is structurally similar to type III secretion system (T3SS) chaperones (T3SC) that bind effector proteins, and is homologous to YbjN, a putative sensory transduction regulator protein found in Proteobacteria.
Links
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Statistics
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PSSM-Id: 409320
Aligned: 35 rows
Threshold Bit Score: 83.447
Created: 17-Jan-2017
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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dimer interface
Conserved site includes 28 residues -Click on image for an interactive view with Cn3D
Feature 1:dimer interface [polypeptide binding site]
Evidence:
  • Structure:2PLG: Synechococcus elongatus T110839 protein homodimer; contacts at 4.0A
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Feature 1                                                             # # #            ##  ## ###
2PLG_A        24 AVEIIETVISSLHQGdapl---vgqtDSGKIWXFRYGSAEVFVQLSGht-eeDFLTIWSPVLPLPv--aDELALYRKLLT 97  Synechococcus e...
Q8YVL5        26 HVEVIENVIDSLEQDdsamv--shtpEGGYLWKFKYGTVEVFVQLTGks-deDTITVWSVVLKLPa--kNEPKLLRHLLE 100 Nostoc sp. PCC ...
Q7NG79        54 HREEVEAVIASLAMEgsvrfaqlkesDKGLMWIFKYGTVRVFVVMSGes-ndDTLTVWAPVMKLPensaKTGELYAHLLR 132 Gloeobacter vio...
Q10XZ9        33 YIENIETVIAGMAEEqkvm---vaqnEAGHLWKFKYGSVDVYVRLTGet-ddDNLTVWSYVLKLPa--kNEPELMRKLLQ 106 Trichodesmium e...
WP_012828611  15 TIAMVEDVLHELGHEvaasr-sepsdGEQRAWQVEHGSATVRIGMGErg-gvSNLRVVSTVMTLDps-aEVVALLRRLLE 91  Haliangium ochr...
Q31NC7        22 YIDIIETVISSLADAdsaq---vshtGSGTIWKFRYGQLEVFVQLTGss-edDLFTVWAKVFPLSe--sTDATLLQRLLT 95  Synechococcus e...
P73244        23 HHDVVETVISGMAQEnsaf---vqdnDQGSIWKFAYGSVEVLVQLTGeg-enDLFRVWAEVMPLPt---DPGQLLAEVMQ 95  Synechocystis s...
SFC77198      19 TNQNIEHYLSQLFDEye-------ivKVDDIYSFSFGTVTVCIRVVPwhsedALVSVFSYLAENVt---VSEEFAKELLH 88  Flexibacter fle...
WP_029165712  19 TKNTVTALLGELFDPed-------ltSVEDLHSFPFGSATIQIQVLPwhaedVLVRVFSYLVENVd--pSKEGLCEKLLR 89  Aminiphilus cir...
WP_015796896   3 NVEMIRAFIARVLEDgglvd-graeaDSDGDYQLRYGSALYWVSAGEaddglGLVQVFGVVLEDVp---LSKKLLTAVNE 78  Catenulispora a...

Feature 1         #    ## #####     # # ### ## #  #  #                  
2PLG_A        98 LNwltTFEAHFAIAe-EQVQVVASRTLGGITAGEISRLITIVATLADDYDDALRA 151 Synechococcus elongatus
Q8YVL5       101 LNcssTFEARFGIIe-DQVVVISTRTLAELSPGEVSRIITIVATIADDNDEALQS 154 Nostoc sp. PCC 7120
Q7NG79       133 SNwleTWEARFCLRe-NEVALHTMRTLDSLDPAEISRAITIVATLADEYDEPLIE 186 Gloeobacter violaceus
Q10XZ9       107 MNwlsTMESHFAIVd-NQIVVVATRTVAELSPGEISRAITIVATLADDNDELLVA 160 Trichodesmium erythraeum IMS101
WP_012828611  92 LNrttLRSAAFALEg-DYVQIVAERPTLDLDRSEVLDLIRRIEKYADDLDDELVA 145 Haliangium ochraceum
Q31NC7        96 LNwadTLEARFALYd-DHITMVASRTVADLSAGEISRAITLVASIAATYAEGLPS 149 Synechococcus elongatus PCC 7942
P73244        96 LNwsdTFEACFALRe-NHLVALHQRTVADLSPSEISRAITLVATLADDHDDRLKE 149 Synechocystis sp. PCC 6803
SFC77198      89 LNa-tIPFGSFGLSf-DSVVFTYSLPASNLDFSEFSAAVQTVAYIADEYDEMVKE 141 Flexibacter flexilis DSM 6793
WP_029165712  90 LNa-tVPLGAFSLVfdGTIMFSCSLAGANLDKNELLGALQTVAAYADQYDDILKA 143 Aminiphilus circumscriptus
WP_015796896  79 INsgyLWVRCYWAQ--GRLTVARDLAADTLTADQLTGACAQIGRIADEYDDRFKE 131 Catenulispora acidiphila

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