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Taxonomy browser (Trichodesmium erythraeum IMS101)

Trichodesmium erythraeum IMS101

Taxonomy ID: 203124 (for references in articles please use NCBI:txid203124)
current name
Trichodesmium erythraeum IMS101
equivalent:
Trichodesmium erythraeum str. IMS101
Trichodesmium erythraeum strain IMS101
NCBI BLAST name: cyanobacteria
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Trichodesmium sp. IMS101
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Cyanobacteria/Melainabacteria group; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleaceae; Trichodesmium; Trichodesmium erythraeum
   Entrez records   
Database name Direct links
Nucleotide 416
Protein 745
Structure 5
Popset 4
GEO Datasets 97
PubMed Central 23
Gene 5,127
SRA Experiments 76
Identical Protein Groups 477
Bio Project 12
Bio Sample 77
Bio Systems 182
Probe 23
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Walworth N et al. (2015)
Walworth, N., Pfreundt, U., Nelson, W.C., Mincer, T., Heidelberg, J.F., Fu, F., Waterbury, J.B., Glavina Del Rio, T., Goodwin, L., Kyrpides, N.C., Land, M.L., Woyke, T., Hutchins, D.A., Hess, W.R., and Webb, E.A. "Trichodesmium genome maintains abundant, widespread noncoding DNA in situ, despite oligotrophic lifestyle." Proc. Natl. Acad. Sci. USA (2015) 112:4251-4256.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Trichodesmium erythraeum IMS101 organism-specific BioCyc
GOLD: Go0000330 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
2 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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