1F5S,3P96,3M1Y,3N28,4EZE


Conserved Protein Domain Family
HAD_PSP

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cd07500: HAD_PSP 
Click on image for an interactive view with Cn3D
phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p
This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Statistics
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PSSM-Id: 319803
Aligned: 30 rows
Threshold Bit Score: 247.076
Created: 10-Jul-2008
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 13 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #####                                                                       
1F5S_A      7 LILFDFDSTLVnnetIDEIAREAGVeeevkkiTKEAMEGklnfeqSLRKRVSLLkdlpieKVEKaikri-tpteGAEETI 85  Methanocaldococcus...
NP_661079 194 LVVFDMDSTLItsevIDELAKEAGSgelvaaiTEQAMRGeldfteSLKKRVGTLagleesTLQKvaerl-qlteGAEHLF 272 Chlorobium tepidum...
AAD53906  116 RGSSDMDSTAIadecMDELADYAGFrkeseeiTIRAMRGelnfdeSLKARTKLLaglktsVIQEcvrdrihltpGIKTLI 195 Zymomonas mobilis ...
NP_868155 273 IVALDMDSTLLqaevIDELAKEAGAgekvsaiTEAAMRGeidfdeSLRQRVQSLeglpesVLPKvaerl-qlteGAERLL 351 Pirellula sp. 1
15600153  217 LAVFDMDSTLIeaevIDELAKAAGVgekvaaiTERAMRGeldfraSFKERLALLqglsedVLEEigasl-rlteGAETLF 295 Pseudomonas aerugi...
NP_809745 197 LICFDMDSTLIetevIDELAIRAGVgdevkaiTESAMRGeidfteSFTRRVALLkgldesVMQEiaesl-piteGVDRLM 275 Bacteroides thetai...
NP_274018  72 LIVSDMDSTLItiecVDEIAAGVGLknkvaeiTERSMRGeldfeqSLRSRVALLaglderVLADvyenvlklspGAEFLL 151 Neisseria meningit...
NP_355008  82 LLIADMDSTMIgqecIDELAAEVGLkdkvsaiTARAMNGeiafepALRERVALLkglpvsVIDDviekritltsGGKELI 161 Agrobacterium fabr...
YP_425557  86 LLIADMDSTMVigetLDDLAAHAGLkdkiaaiTARAMNGeidfeaALRERVGMLaglsasALEEtwaat-altpGGRTLV 164 Rhodospirillum rub...
NP_420900  83 LLIADMDSTIInvecLDELADFAGVkaqvseiTERAMRGelafegALRERVGMLkglgvsALQAcydervrlnpGAETLV 162 Caulobacter cresce...
Feature 1                  ###                                          #                     
1F5S_A     86 KELknrGYVVAVVSGGFdIAVNKIKEKLglDYAFANRLivkdgklTGDVEGevlkenaKGEILEKIAkieginledTVAV 165 Methanocaldococcus...
NP_661079 273 YNLhrlGFKTAILSGGFtYFGRYLQKKLniDYVFANELeivdgkmTGNVIGqvvdgkrKAELLEQIAatenirleqTVAV 352 Chlorobium tepidum...
AAD53906  196 QTMnanGAHCFLVSGGFlDFAVPVAKEIgfEKPFANTLevegdtlTGRVLDpilgpetKKEILQEECqrfgikleeTITL 275 Zymomonas mobilis ...
NP_868155 352 SNLrrfGYTTAILSGGFtYFGEHLQKLLgiDHVHANQLeivdgklTGRVLGpivnaerKALLLEQLAanegvdrkqMIAI 431 Pirellula sp. 1
15600153  296 AELkrlGYKTAILSGGFtYFARQLQAKLgiDYVFANELqivdgkvTGVAVEpivdaqrKADLLRELAakeglsleqTIAV 375 Pseudomonas aerugi...
NP_809745 276 YVLkkyGYKIAILSGGFtYFGQYLQKKYgiDYVYANELeivdgklTGRYLGdvvdgkrKAELLRLIAqvekvdiaqTIAV 355 Bacteroides thetai...
NP_274018 152 DECkrhDVKFLLVSGGFtFFTERLQQRLgfEYQHANVLeiengrlTGRLKGriidaqaKADLLREYRsrlglqphqVLAV 231 Neisseria meningit...
NP_355008 162 ATMkakGYYTALVSGGFtVFTNRVAAMLgfDENRANLLgeangelDGTVAEpilgkqaKVDALNDIAarlgisseeAMAV 241 Agrobacterium fabr...
YP_425557 165 RTMaanGARCVLVSGGFsVFTAKVAKACgfHDHVANRLeiidgalSGKVIDpvvdravKLATLKAEAaklglplsaCAAV 244 Rhodospirillum rub...
NP_420900 163 RTMakhGARCALVSGGFtFFTSRVAEAAgfHLNRANTLieldgalTGAVGDpilgkeaKLAALREETaalgltpadALAV 242 Caulobacter cresce...
Feature 1     ##  ##               
1F5S_A    166 GDGANDISMFKKaGLKIAFCA 186 Methanocaldococcus jannaschii
NP_661079 353 GDGANDLPMLGKaGLGIAFRA 373 Chlorobium tepidum TLS
AAD53906  276 GDGANDIPMIEAaGLGVAYHA 296 Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
NP_868155 432 GDGANDLPMLSRaGLGIAFHA 452 Pirellula sp. 1
15600153  376 GDGANDLPMLGLaGLGVAFRA 396 Pseudomonas aeruginosa PA01
NP_809745 356 GDGANDLPMLGIaGLGIAFHA 376 Bacteroides thetaiotaomicron VPI-5482
NP_274018 232 GDGANDIPMLKEaGIGVAYRA 252 Neisseria meningitidis MC58
NP_355008 242 GDGANDLGMLHVaGAGVALHA 262 Agrobacterium fabrum str. C58
YP_425557 245 GDGANDLPMVMAaGLGVAFHA 265 Rhodospirillum rubrum ATCC 11170
NP_420900 243 GDGANDLAMIEAaGLGVAYRA 263 Caulobacter crescentus CB15

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