1CG2


Conserved Protein Domain Family
M20_CPDG2

?
cd03885: M20_CPDG2 
Click on image for an interactive view with Cn3D
M20 Peptidase Glutamate carboxypeptidase, a periplasmic enzyme
Peptidase M20 family, Glutamate carboxypeptidase (carboxypeptidase G; carboxypeptidase G1; carboxypeptidase G2; CPDG2; CPG2; Folate hydrolase G2; Pteroylmonoglutamic acid hydrolase G2; Glucarpidase; E.C. 3.4.17.11) subfamily. CPDG2 is a periplasmic enzyme that is synthesized with a signal peptide. It is a dimeric zinc-dependent exopeptidase, with two domains, a catalytic domain, which provides the ligands for the two zinc ions in the active site, and a dimerization domain. CPDG2 cleaves the C-terminal glutamate moiety from a wide range of N-acyl groups, including peptidyl, aminoacyl, benzoyl, benzyloxycarbonyl, folyl, and pteroyl groups to release benzoic acid, phenol, and aniline mustards. It is used clinically to treat methotrexate toxicity by hydrolyzing it to inactive and non-toxic metabolites. It is also proposed for use in antibody-directed enzyme prodrug therapy; for example, glutamate can be cleaved from glutamated benzoyl nitrogen mustards, producing nitrogen mustards with effective cytotoxicity against tumor cells.
Statistics
?
PSSM-Id: 349881
Aligned: 36 rows
Threshold Bit Score: 339.181
Created: 16-Jun-2005
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
 
metal bindingdimer interface
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1: metal binding site [ion binding site], 6 residue positions
Conserved feature residue pattern:H D E E E HClick to see conserved feature residue pattern help
Evidence:
  • Structure:1CG2: Pseudomonas sp. Carboxypeptidase G2 bound to two Zn(II) ions; contacts at 4.0A
  • Citation:PMID 9083113

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                    #
1CG2_A     21 VIKTLEKLVNIETGTgd-aEGIAAAGNFLEAELKnlGFTVTRSksag---------lvvGDNIVGKIKGrggkNLLLMSH 90  Pseudomonas sp.
NP_940716  41 QVSFLETLVNINSGTen-vKGVTQVGNLMKQKLDelGFETQWHalpa--------gmnhAGSLVAVHKGkspkRMLLIGH 111 Pseudomonas syring...
ADP10745   43 QLKLLENMVNINSGTen-sQGVKKMGEMVRPEFEsmGFKTQWVdlpa--------tmkhAGSLVATHSGsg-kRILLIGH 112 Erwinia sp. Ejp617
4980621     3 WIEIYEKLVNIDTGPdlplEGKLRRTSFLTEILEdlGFRVEKRe---------------AAYVAFRGKPp---YVTLIGH 64  Thermotoga maritim...
ADU39528   44 VIKTLEKLVNIETGTgd-aEGIAAAGNYLEGELKnlGFTVTRSksag---------lvvGDNIIGKIKGrggkNLLLMSH 113 Variovorax paradox...
ADU35925   46 VIDNLKEMVQIESGSln-vDGLLKMADVIEGRLKaaGFKTERRktea---------gagADIVIGTLKGtgkrKIMLQGH 115 Variovorax paradox...
CAD16802   48 LIDTMKTLVSIESGSrd-lEGLDRIAGVIADRLRllGGDVKLVdptdhayrmadtpekiGKMVLARFKGegkrNIMLIAH 126 Ralstonia solanace...
NP_770389  72 LLDTLRDLVGIESGSkd-vDGLEKIAERVAGQLKqlGGTVEILhptdiyrl-ddtpetiGPAVHAVFKGtgskKIMLIAH 149 Bradyrhizobium jap...
NP_251477  43 YLDTLRQLVAVDSGTgq-aEGLGQLSALLAERLQalGAQVRSApat----------psaGDNLVATLDGtgskRFLLMIH 111 Pseudomonas aerugi...
NP_793018  45 ALKLLERLVNIDSGSgy-vPGLTQVSDIAIEELKklGATIELVpnt----------peaSNHVLATLKGtgkaKILLMAH 113 Pseudomonas syring...
Feature 1                                   #                                 ##              
1CG2_A     91 MDTVYLKGilaKAPFRVEg--DKAYGPGIADDKGGNAVILHTLKLLKeygvrdygTITVLFNTDEE-KGSF--GSRDLIQ 165 Pseudomonas sp.
NP_940716 112 LDTVFPEEs-kFQKFTYIeegKKAKGPGVIDDKGGMVTMLYALQALKangslenmNIAVVLVGDEElAARPtdISRKVLT 190 Pseudomonas syring...
ADP10745  113 LDTVFPINs-pFQSFTLSadqKFATGPGVIDDKGGVVTLLYALKALKhagklnnaNITVVLTGDEEqAAKPteISRQALR 191 Erwinia sp. Ejp617
4980621    65 LDTVFPEGeskRRPFTIEg--NIAKGPGVCDMKGGVVILLESLKRFLqqn---dtDLCVVLNVDEE-LGSP--LSGEVFK 136 Thermotoga maritim...
ADU39528  114 MDTVYLKGtlaKAPFKVEg--DKAYGPGIADDKGGNAVILHTLKLLKdygvrdygTITVLFNTDEE-KGSF--GSRDLIQ 188 Variovorax paradox...
ADU35925  116 MDTVYAAGilgSQPYKVDg--NRIYGPGIADDKGGIAVMLASLKILAdagwrdydTLTVLVNPDEE-VGSV--GSGELIA 190 Variovorax paradox...
CAD16802  127 MDTVYLKGmlaQQPFRIDg--DRAYGLGIADDKNGVAVILHTVSILQsvgfkqygTLTVLINGDEE-ISSP--GARTLLA 201 Ralstonia solanace...
NP_770389 150 MDTVYLKGmlkDQPFRVDg--DKAYGLGIADDKQGVALILHTVAMLQklnfkdygTLTVLTNGDEE-ISSP--GWRSTIA 224 Bradyrhizobium jap...
NP_251477 112 YDTVFAAGsaaKRPFREDa--ERAYGPGVADAKGGVAMVLHALALLRqqgfrdygRITVLFNPDEE-TGSA--GSKQLIA 186 Pseudomonas aerugi...
NP_793018 114 MDTVFKEGsaaERPFHIKd--GRAYGPGVMDDKGGIVAAIYALKVLHnlkftdyaQITVLLDASEE-TGSV--VATELIK 188 Pseudomonas syring...
Feature 1                 #                                                                   
1CG2_A    166 EEAklADYVLSFEPTsa----gdEKLSLGTSGIAYVQVNITGKASHAGAAp--eLGVNALVEASDLVLRTMNIddk---a 236 Pseudomonas sp.
NP_940716 191 DEAkkSDVALGFEFAls-----aNQLVTNRRGLSEWFLTSKGVEQHSAKIfqpiTGFGAIYESARVLDQIRSQlsn---t 262 Pseudomonas syring...
ADP10745  192 EAAqgSDIALGFEFSla-----eDQLVTNRRGLSEWYLSSTGQSRHSSTVfgpeSGDGAIYETARVLNAFRTAfaetsva 266 Erwinia sp. Ejp617
4980621   137 EVAgmSSHCLSFEPGre-----nGELISSRKGIISLWLFARGKKGHASRLd---EGANAIVELAFKVVELTSLngr---f 205 Thermotoga maritim...
ADU39528  189 EEAklADYVLSFEPTsa----gdEKLSLGTSGIAYVQVNITGKASHAGAAp--eLGVNALVEASDLVLRTMSIddk---t 259 Variovorax paradox...
ADU35925  191 TTAdlHDTVLSFEPTaaksvakgESLLLGAAGIAQATMEVKGRAAHAGAAp--eLGRNALYELSYQMLQTKDLakd---i 265 Variovorax paradox...
CAD16802  202 KLGaeQDAVFSCEGTra----stDKLSLATSGIGAILLDVKGKASHAGGAp--eQGRNALYELSHQVLQLRDLsnp---q 272 Ralstonia solanace...
NP_770389 225 KFAadQDVVFSFEGGgt-----dGTLRLATSGIGSAYLTVQGKSSHAGARp--eGGVNALYELSHQVLQMKDLskp---e 294 Bradyrhizobium jap...
NP_251477 187 ELArqQDYVFSYEPPd------rDAVTVATNGIDGLLLEVKGRSSHAGSAp--eQGRNAILELSHQLLRLKDLgdp---a 255 Pseudomonas aerugi...
NP_793018 189 KTAreHDVTLNLEPGrp-----aDGLVVWRKGSATALVEVKGKASHAGVAp--eLGRNAATEVAHQILQLGKLgde---e 258 Pseudomonas syring...
Feature 1                                                                                     
1CG2_A    237 kNLRFNWTIAKAGn---------------vSNIIPASATLNADVRYARnedfDAAMKTLEERAQqkkl---peaDVKVIV 298 Pseudomonas sp.
NP_940716 263 pGLTINPGIALGGasaseyiengkgvatgrKTSVAAASLVHGDLRFASddqkALAESKIKAIVSnpl----antSSEFVL 338 Pseudomonas syring...
ADP10745  267 sGLTLNPGLILGGqtvsedvqqntgnasgkKTVIAAQTLVHGDLRFYSedqkNKAEQKMREIAGtsl----pltSSQLTF 342 Erwinia sp. Ejp617
4980621   206 pNLTLNPTIVKGGa---------------eSNVTPDKAEVYFDVRYYDdkeyEFLEETLKRLSAvhp-----eaNVSYTL 265 Thermotoga maritim...
ADU39528  260 kHLRFNWTIAKAGn---------------vSNIIPASATLNADVRYARnedfEAAMKTLEEKAQqkklp-eadvKVLVTR 323 Variovorax paradox...
ADU35925  266 pGVTLNWTVARATg---------------pINQITEKAQALGDIRITQpgaeKKLNEVLQAKIAsgklipdtetTVKVEV 330 Variovorax paradox...
CAD16802  273 tGLKVNWTLAQAGt---------------nRNVIPATASAQADVRLLRaadaDKLEDTINERIKtrli---pdtLVTARF 334 Ralstonia solanace...
NP_770389 295 qGLKLNWTVSKAGt---------------nRNVIPADATAQADARALKvadfDELQKALQEKIKnrll---pdsRVELKF 356 Bradyrhizobium jap...
NP_251477 256 kGTTLNWTLARGGe---------------kRNIIPAEASAEADMRYSDpaesERVLADARKLTGerlva-dtevSLRLDK 319 Pseudomonas aerugi...
NP_793018 259 kKTTINFTVLKAGd---------------rTNVIPDQASAKADVRAAVpeefDRIEKDLAKVSAnklvp-dtevKTSLVR 322 Pseudomonas syring...
Feature 1                                                                           #         
1CG2_A    299 TRgrPAFNAgEGGKKLVDKAVAYyk-eAGGTLg--VEERTGGGTDAAYAALs---gKPVIESLGLPGFGYHSdkAEYVDI 372 Pseudomonas sp.
NP_940716 339 KPimPVMEEtKGNLELLKQYSEVsqdlAGPALe-pVPSAERGGADISYISKf---vNASLDGLGAAGDATHTe-NEIIDL 413 Pseudomonas syring...
ADP10745  343 KDimPAMPEtDGNRQLLAQFSAInt-aLGGPQlksVPAAERGGSDVSYIAQt---vSASIDGLGPWGKGAHGl-NETLEA 417 Erwinia sp. Ejp617
4980621   266 KLrrLPMKEdPDFVNIVKMSAEE----IGMTV---SFVRATGGGDVAFFSQn---gVPSIDGLGIPGGKMHSe-DEYARL 334 Thermotoga maritim...
ADU39528  324 GR--PAFNAgEGGKKLVDKAVAFyk-eAGGTLg--VEERTGGGTDAAYAALs---gKPVIESLGLPGFGYHSdkAEYVDI 395 Variovorax paradox...
ADU35925  331 GR--PAFVAgAKGRALAEKAQAIyk-eIDRDLa--LTPMTGGGTDAGFAGRsg--kATVVESFGLAGFGYHAr-DEYIEV 402 Variovorax paradox...
CAD16802  335 ERrrPPLEAtPASHRLGEHAQKIyg-eLGKSLe-iDDKAEGGGTDAAFAASrt--qAPVLERFGLAGAGAHSneAEYVDL 410 Ralstonia solanace...
NP_770389 357 EVrrPPLEAnDASRRVAAYGKTIyg-eIGLSLk-vDEKATGGGTDAAFAALkt--sGAVVEGMGLSGFGAHSndAEYVQI 432 Bradyrhizobium jap...
NP_251477 320 GR--PPLVKnPASQRLAETAQTLyg-rIGKRI---EPIAMRFGTDAGYAYVpgsdkPAVLETLGVVGAGLHSe-AEYLEL 392 Pseudomonas aerugi...
NP_793018 323 GL--PPMPQtAQSDALVAMAQGIyg-eLGRTL---TIEGSGGAADSSLSASv---gTPTLDGFGIVGGNIHTp-EEYAEV 392 Pseudomonas syring...
Feature 1                    
1CG2_A    373 SAIPRRLYMAARLIM 387 Pseudomonas sp.
NP_940716 414 SSLVVATKRAAIFMS 428 Pseudomonas syringae pv. syringae
ADP10745  418 ASLPVASKRAAIFIS 432 Erwinia sp. Ejp617
4980621   335 DQFEDRVNLVVHLLR 349 Thermotoga maritima MSB8
ADU39528  396 SSIPRRLYMAARLIM 410 Variovorax paradoxus EPS
ADU35925  403 DSIVPRIYLVTRLLT 417 Variovorax paradoxus EPS
CAD16802  411 NSIVPRLYLLSRMVM 425 Ralstonia solanacearum GMI1000
NP_770389 433 NSIVPRLYLATRMIM 447 Bradyrhizobium japonicum USDA 110
NP_251477 393 SSIAPRLYLTVALIR 407 Pseudomonas aeruginosa PAO1
NP_793018 393 GSVAPRIYLLSRMIM 407 Pseudomonas syringae pv. tomato str. DC3000

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap