6PCF,6NL3,6PCE,6TDV


Conserved Protein Domain Family
CHCH_COA6

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cd00926: CHCH_COA6 (This model is not part of the current CDD release)
CHCH domain found in cytochrome c oxidase assembly factor 6 (COA6) and similar proteins
COA6, also called cytochrome c oxidase subunit VIb, is involved in the maturation of the mitochondrial respiratory chain complex IV subunit MT-CO2/COX2. It is thought to regulate the early steps of complex IV assembly. Mitochondrial respiratory chain complex IV or cytochrome c oxidase is the component of the respiratory chain that catalyzes the transfer of electrons from intermembrane space cytochrome c to molecular oxygen in the matrix and therefore contributes to the proton gradient involved in mitochondrial ATP synthesis. COA6 may also be required for efficient formation of respiratory supercomplexes comprised of complexes III and IV. The family also includes Euglena gracilis ATPEG5, a component of the mitochondrial ATP synthase. ATPEG5 is a structurally conserved ortholog of the cytochrome c oxidase subunit VIb family. Members of this family contain a CHCH ([coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2]) domain with a disulfide-bonded alpha-hairpin conformation. Unlike other CHCH-containing proteins, the CHCH domain of COA6 contains a C-X9-C motif in the first helix, but the second helix is a C-X10-C motif.
Statistics
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PSSM-Id: 502470
Aligned: 176 rows
Threshold Bit Score: 46.9083
Created: 11-Apr-2003
Updated: 30-Oct-2024
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:homodimer interface [polypeptide binding site]
Evidence:
  • Structure:6PCE: Homo sapiens COA6 forms a homodimer, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #                                                                          ##
6PCF_B      4 MKERQVCCGARDEYWKCLDENle-------------------------------------daSQCKKLRSSFESSCPQQW 46  human
6PCE_A      3 MKERQVCWGARDEYWKCLDENle-------------------------------------daSQCKKLRSSFESSCPQQW 45  human
KIO26732    6 RTQRQRCWEARDAYYKCLDSLkvntp--------------------------------geegGKCAEEVAAFSKACAASW 53  Tulasnella calospo...
KNE71756   30 KSRRRVCWAARDAYLVCLDQTygvdap------------------------------sadpqGACKHLLAEFHAACPGSW 79  Allomyces macrogyn...
OON08643    7 RSERSKCWSARDAYFACLDERklwlhgfaptdydeivkldplakhgksegdrtltkeergklFTCSQTKLFFEKECLPSW 86  Batrachochytrium s...
ORY41939    9 KSARARCWAARDAYFSCLDTNnlwldglavsgheaivaldvskppikqpgdktltkeekeklFVCRKKLDEFGNECLASW 88  Rhizoclosmatium gl...
ORZ33372   38 RSKRKICWDARDAYLTCLDRSygvdap------------------------------svdpnSACVRELAEFQKVCPTSW 87  Catenaria anguillu...
RKP00208   14 KEERQACWHARDRYFACLDQHqlwlqglepvddhsvigidp--trppiqpraalsaaeadrlYPCMAMKQLFETACLPSW 91  Caulochytrium prot...
RKP05619    4 KQARKVCWAARDAYFACLDRAnivdan------------------------------tpeadKACGELVAQFKASCPSSW 53  Thamnocephalis sph...
TPX59176   15 RSDRAKCWKARDAYFRCLDSHglylqglapqtheeiiaidpqrltvasekdrnlskddkkklFACRETKEEFDTGCLASW 94  Powellomyces hirtus
Feature 1      ##  ##  #  #  ##
6PCF_B     47 IKYFDKRRDYLKFKEKF 63  human
6PCE_A     46 IKYFDKRRDYLKFKEKF 62  human
KIO26732   54 VEHFNRKRVFDIKQAAA 70  Tulasnella calospora MUT 4182
KNE71756   80 VKHFMQKREAEIRDRKL 96  Allomyces macrogynus ATCC 38327
OON08643   87 VYHFGMLRVKELQSKAM 103 Batrachochytrium salamandrivorans
ORY41939   89 VFHFSMLRVKELQTKHL 105 Rhizoclosmatium globosum
ORZ33372   88 VKHFINKREGDIRDRKL 104 Catenaria anguillulae PL171
RKP00208   92 VVNFESYRVKHMQDAFL 108 Caulochytrium protostelioides
RKP05619   54 VEYFKTRRVLDARQRAM 70  Thamnocephalis sphaerospora
TPX59176   95 VQHFSLLRVKDLQTAHM 111 Powellomyces hirtus

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